RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 YWHAEP62258 255 aaKnown RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 PPIDQ08752 370 aaKnown RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 CDC20Q12834 499 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 TSC22D1Q15714 1073 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 HADHQ16836 314 aaKnown RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 C16orf87Q6PH81 154 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 RTL4Q6ZR62 310 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 BHLHA15Q7RTS1 189 aaPredicted RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 MDP1Q86V88 176 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF645Q8N7E2 425 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF615Q8N8J6 731 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 NECAP1Q8NC96 275 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 OR9A2Q8NGT5 310 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 ASZ1Q8WWH4 475 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 ESR2Q92731 530 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 GHSRQ92847 366 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 NAT6Q93015 286 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 RCN3Q96D15 328 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 SAMD10Q9BYL1 202 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 CYP3A43Q9HB55 503 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 CD209Q9NNX6 404 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 C8orf17Q9NRJ1 99 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 PEF1Q9UBV8 284 aaKnown RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 GGA2Q9UJY4 613 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 NUP214P35658 2090 aaPredicted RBP2.46□□□□□ -2.02
PTPRK-215ENST00000498284 EYSQ5T1H1 3165 aa2.46□□□□□ -2.02
PTPRK-215ENST00000498284 EVC2Q86UK5 1308 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 ADGRA3Q8IWK6 1321 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 EDC4Q6P2E9 1401 aaKnown RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 SCN7AQ01118 1682 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 TRAV6A0A075B6T7 132 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 TRAV40A0A0B4J280 105 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR5H1A6NKK0 313 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 TNFRSF11BO00300 401 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 CHMP2AO43633 222 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 SERPINB7O75635 380 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 GLSO94925 669 aaPredicted RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 PAHP00439 452 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 CATP04040 527 aaKnown RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 LOXP28300 417 aaPredicted RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 POLR2IP36954 125 aaKnown RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 MYCNOSP40205 109 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 DAOAP59103 153 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 LCN2P80188 198 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 PNOCQ13519 176 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 CST9Q5W186 159 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR2T5Q6IEZ7 315 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 ULK3Q6PHR2 472 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 USP50Q70EL3 339 aaPredicted RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 MRPL21Q7Z2W9 205 aaKnown RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 RAB43Q86YS6 212 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 RNF182Q8N6D2 247 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 C19orf18Q8NEA5 215 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR5T3Q8NGG3 340 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR13G1Q8NGZ3 307 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR2T29Q8NH02 315 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 SLC25A46Q96AG3 418 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF707Q96C28 371 aaPredicted RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 BCL7BQ9BQE9 202 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 IL22Q9GZX6 179 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 OR2AG1Q9H205 316 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 EXOSC4Q9NPD3 245 aaKnown RBP2.45□□□□□ -2.02
PTPRK-215ENST00000498284 PRSS16Q9NQE7 514 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 RHBDL2Q9NX52 303 aa2.45□□□□□ -2.02
PTPRK-215ENST00000498284 ARPC4-TTLL3A0A0A6YYG9 625 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 LINC00854A0A1B0GVQ3 168 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 SLC22A20A6NK97 555 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF850A8MQ14 1090 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF99A8MXY4 864 aaPredicted RBP2.44□□□□□ -2.02
PTPRK-215ENST00000498284 RRP8O43159 456 aaKnown RBP2.44□□□□□ -2.02
PTPRK-215ENST00000498284 RBBP9O75884 186 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 IGHV3-11P01762 117 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 MSR1P21757 451 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 BMI1P35226 326 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 IFITM3Q01628 133 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 SIGLEC14Q08ET2 396 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 C5orf64Q2M2E5 130 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 YIF1BQ5BJH7 314 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 RNASE13Q5GAN3 156 aaKnown RBP2.44□□□□□ -2.02
PTPRK-215ENST00000498284 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 H3F3CQ6NXT2 135 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 TMPRSS11AQ6ZMR5 421 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 VTCN1Q7Z7D3 282 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF321PQ8N8H1 164 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 ZNF721Q8TF20 911 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 CDS1Q92903 461 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 CTRCQ99895 268 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 AGMATQ9BSE5 352 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 TIMM29Q9BSF4 260 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 RTBDNQ9BSG5 229 aaPredicted RBP2.44□□□□□ -2.02
PTPRK-215ENST00000498284 TOLLIPQ9H0E2 274 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 COMMD3-BMI1R4GMX3 469 aa2.44□□□□□ -2.02
PTPRK-215ENST00000498284 KIF20BQ96Q89 1820 aa2.43□□□□□ -2.02
PTPRK-215ENST00000498284 IGLV2-18A0A075B6J9 118 aa2.43□□□□□ -2.02
PTPRK-215ENST00000498284 IGKV1-27A0A075B6S5 117 aa2.43□□□□□ -2.02
PTPRK-215ENST00000498284 IGHV7-4-1A0A0J9YVY3 117 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms