RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PEX13Q92968 403 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IL17FQ96PD4 163 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NKX3-1Q99801 234 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 CDK19Q9BWU1 502 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF436Q9C0F3 470 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MAGT1Q9H0U3 335 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TLNRD1Q9H1K6 362 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C20orf85Q9H1P6 137 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PSTPIP2Q9H939 334 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZBTB20Q9HC78 741 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM8AQ9HCN3 771 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 G6PC2Q9NQR9 355 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 GKN1Q9NS71 199 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FGF21Q9NSA1 209 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 GINM1Q9NU53 330 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MRPS18AQ9NVS2 196 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 HPF1Q9NWY4 346 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 JKAMPQ9P055 326 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 LEF1Q9UJU2 399 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PYCARDQ9ULZ3 195 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMA7Q9Y2S6 64 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 STAB2Q8WWQ8 2551 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IGKV2-40A0A087WW87 121 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ILVBLA1L0T0 632 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 EIF3HO15372 352 aaKnown RBP eCLIP1.19□□□□□ -2.22
XRN1-214ENST00000498077 NUPL2O15504 423 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ERI3O43414 337 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 BRINP1O60477 761 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 GALR3O60755 368 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 EEDO75530 441 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 GLP2RO95838 553 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IGKV2D-40P01614 121 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 GYPCP04921 128 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM106CPP0CH98 169 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CALCBP10092 127 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ANXA8P13928 327 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PGAM1P18669 254 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PSMB5P28074 263 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CAPZBP47756 277 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HSPA13P48723 471 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 STX1BP61266 288 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RPL30P62888 115 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 HBG1P69891 147 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SP4Q02446 784 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SF3A3Q12874 501 aaKnown RBP eCLIP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PAK2Q13177 524 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 GUCA2BQ16661 112 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FAM106AQ4KMX7 169 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TP53I3Q53FA7 332 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C6orf89Q6UWU4 347 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 Q6ZTC4 211 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 KCTD1Q719H9 257 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF551Q7Z340 670 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 GTSCR1Q86UQ5 136 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 DND1Q8IYX4 353 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PGAM4Q8N0Y7 254 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 UBE2J2Q8N2K1 259 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 POGLUT1Q8NBL1 392 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR9Q2Q8NGE9 314 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR4A5Q8NH83 315 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C9orf43Q8TAL5 461 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC35E1Q96K37 410 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SENP8Q96LD8 212 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NAP1L5Q96NT1 182 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TBX15Q96SF7 602 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SEPHS2Q99611 448 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC29A1Q99808 456 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM70Q9BUB7 260 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 G6PC3Q9BUM1 346 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 GATA5Q9BWX5 397 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 LRRC27Q9C0I9 530 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C1orf21Q9H246 121 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC26A1Q9H2B4 701 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NXF3Q9H4D5 531 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 VCX3AQ9NNX9 186 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IL26Q9NPH9 171 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MCUBQ9NWR8 336 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C2orf42Q9NWW7 574 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RAB20Q9NX57 234 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NKIRAS2Q9NYR9 191 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 WDR45Q9Y484 360 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NFASCO94856 1347 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FER1L5A0AVI2 2057 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PIKFYVEQ9Y2I7 2098 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 INS-IGF2F8WCM5 200 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 M0QZ24 198 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 M0R3E3 92 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PI15O43692 258 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CPSF4O95639 269 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 MOCS2O96007 188 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 MT-ATP6P00846 226 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IFNA1P01562 189 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ETFAP13804 333 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MMP9P14780 707 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CSNK2A2P19784 350 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 DTYMKP23919 212 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZFP36P26651 326 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 CYLC1P35663 651 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms