RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 JAGN1Q8N5M9 183 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 DEFB108BQ8NET1 73 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 ZNF671Q8TAW3 534 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 RAB1CQ92928 201 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 YIPF6Q96EC8 236 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 TIMD4Q96H15 378 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 FAM192AQ9GZU8 254 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 SLITRK2Q9H156 845 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 SSR3Q9UNL2 185 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 FOXJ3Q9UPW0 622 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 WIPI2Q9Y4P8 454 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 NPTNQ9Y639 398 aa10.01□□□□□ -0.81
CUX1-210ENST00000497815 IGHV3OR15-7A0A075B7D8 119 aa10□□□□□ -0.81
CUX1-210ENST00000497815 RNF223E7ERA6 249 aa10□□□□□ -0.81
CUX1-210ENST00000497815 NDUFS8O00217 210 aa10□□□□□ -0.81
CUX1-210ENST00000497815 WNT9BO14905 357 aa10□□□□□ -0.81
CUX1-210ENST00000497815 ANGPTL7O43827 346 aa10□□□□□ -0.81
CUX1-210ENST00000497815 ALX3O95076 343 aa10□□□□□ -0.81
CUX1-210ENST00000497815 TFAP2AP05549 437 aa10□□□□□ -0.81
CUX1-210ENST00000497815 TMEM225BP0DP42 221 aa10□□□□□ -0.81
CUX1-210ENST00000497815 ADRA2CP18825 462 aa10□□□□□ -0.81
CUX1-210ENST00000497815 GIFP27352 417 aa10□□□□□ -0.81
CUX1-210ENST00000497815 ZNF93P35789 620 aaPredicted RBP10□□□□□ -0.81
CUX1-210ENST00000497815 NR4A2P43354 598 aa10□□□□□ -0.81
CUX1-210ENST00000497815 BTG1P62324 171 aa10□□□□□ -0.81
CUX1-210ENST00000497815 ZMYND11Q15326 602 aa10□□□□□ -0.81
CUX1-210ENST00000497815 LRRTM1Q86UE6 522 aa10□□□□□ -0.81
CUX1-210ENST00000497815 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
CUX1-210ENST00000497815 OR13F1Q8NGS4 319 aa10□□□□□ -0.81
CUX1-210ENST00000497815 TNFAIP8L1Q8WVP5 186 aa10□□□□□ -0.81
CUX1-210ENST00000497815 SEH1LQ96EE3 360 aa10□□□□□ -0.81
CUX1-210ENST00000497815 CPNE2Q96FN4 548 aaPredicted RBP10□□□□□ -0.81
CUX1-210ENST00000497815 PKIBQ9C010 78 aa10□□□□□ -0.81
CUX1-210ENST00000497815 WDR13Q9H1Z4 485 aa10□□□□□ -0.81
CUX1-210ENST00000497815 RNF167Q9H6Y7 350 aa10□□□□□ -0.81
CUX1-210ENST00000497815 TXNL4BQ9NX01 149 aaKnown RBP10□□□□□ -0.81
CUX1-210ENST00000497815 SCOCQ9UIL1 159 aa10□□□□□ -0.81
CUX1-210ENST00000497815 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
CUX1-210ENST00000497815 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
CUX1-210ENST00000497815 NAV2Q8IVL1 2488 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PPIAL4EA0A075B759 164 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 SMIM30A4D0T7 59 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 VWC2LB2RUY7 222 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PPIAL4DF5H284 164 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 CYB5AP00167 134 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 LHBP01229 141 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 ALDOBP05062 364 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PPIAL4FP0DN26 164 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 CALCBP10092 127 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 SLC25A16P16260 332 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 GLRA1P23415 457 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 MYL9P24844 172 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 OR3A4PP47883 348 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 ALDH3B2P48448 385 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 LSM3P62310 102 aaKnown RBP9.99□□□□□ -0.81
CUX1-210ENST00000497815 IL24Q13007 206 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PDZK1IP1Q13113 114 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 CRIP3Q6Q6R5 217 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 GPR141Q7Z602 305 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PNLDC1Q8NA58 520 aaKnown RBP9.99□□□□□ -0.81
CUX1-210ENST00000497815 POC1AQ8NBT0 407 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 OR51F2Q8NH61 342 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 PHYHIPQ92561 330 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 FUNDC2Q9BWH2 189 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 ELL3Q9HB65 397 aaPredicted RBP9.99□□□□□ -0.81
CUX1-210ENST00000497815 SNTG1Q9NSN8 517 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 DNAJB11Q9UBS4 358 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 AK6Q9Y3D8 172 aaKnown RBP9.99□□□□□ -0.81
CUX1-210ENST00000497815 PPIAL4AQ9Y536 164 aa9.99□□□□□ -0.81
CUX1-210ENST00000497815 TANC2Q9HCD6 1990 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 IGKV1-12A0A0C4DH73 117 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 SHISA3A0PJX4 238 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 OOEPA6NGQ2 149 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 SRRM5B3KS81 715 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 F8VVB4 439 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 F8VWA3 439 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 TRAPPC2LH3BP13 241 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 LGALS8O00214 317 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 AIREO43918 545 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 NXPH2O95156 264 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 IGKV1D-12P01611 117 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 IGHV2-70P01814 119 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 PGA5P0DJD9 388 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 BCL3P20749 454 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 GALP22466 123 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 MPZP25189 248 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 FGF9P31371 208 aaPredicted RBP9.98□□□□□ -0.81
CUX1-210ENST00000497815 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
CUX1-210ENST00000497815 SNU13P55769 128 aaKnown RBP9.98□□□□□ -0.81
CUX1-210ENST00000497815 ZP1P60852 638 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 TIMM50Q3ZCQ8 353 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 GPR107Q5VW38 600 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 MKXQ8IYA7 352 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 NKAIN3Q8N8D7 197 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 OR5T2Q8NGG2 359 aa9.98□□□□□ -0.81
CUX1-210ENST00000497815 OR10Z1Q8NGY1 313 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms