RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SATL1Q86VE3 508 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 ANGPTL5Q86XS5 388 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 C11orf53Q8IXP5 236 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 OR51A2Q8NGJ7 313 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 SLITRK2Q9H156 845 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 TLNRD1Q9H1K6 362 aa16.88■□□□□ 0.29
CTSD-206ENST00000497544 TRAV8-7A0A075B6U6 113 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 TRIM64BA6NI03 449 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 RNF212BA8MTL3 300 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 TMEM178BH3BS89 294 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 PPIHO43447 177 aaKnown RBP16.87■□□□□ 0.29
CTSD-206ENST00000497544 CYB5R3P00387 301 aaPredicted RBP16.87■□□□□ 0.29
CTSD-206ENST00000497544 MAS1P04201 325 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 ALDOBP05062 364 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 SRMP19623 302 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 GPR6P46095 362 aaPredicted RBP16.87■□□□□ 0.29
CTSD-206ENST00000497544 CD200R1LQ6Q8B3 271 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 KRTAP1-3Q8IUG1 177 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 BOLLQ8N9W6 283 aaKnown RBP16.87■□□□□ 0.29
CTSD-206ENST00000497544 RAB1CQ92928 201 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 TIMD4Q96H15 378 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 SPACA5Q96QH8 159 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 GPER1Q99527 375 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 PIMREGQ9BSJ6 248 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 SCOCQ9UIL1 159 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 GSTK1Q9Y2Q3 226 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 ZANQ9Y493 2812 aa16.87■□□□□ 0.29
CTSD-206ENST00000497544 IGKV1-27A0A075B6S5 117 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 MEGF11A6BM72 1044 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 INAFM1C9JVW0 142 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 J3QT63 122 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 NDUFS8O00217 210 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 KISS1Q15726 138 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 DDI2Q5TDH0 399 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 OR52N4Q8NGI2 321 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 OR10Z1Q8NGY1 313 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 LRRC29Q8WV35 223 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 AQP3Q92482 292 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 CPNE2Q96FN4 548 aaPredicted RBP16.86■□□□□ 0.29
CTSD-206ENST00000497544 OR51E2Q9H255 320 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 DCAF16Q9NXF7 216 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 POLDIP2Q9Y2S7 368 aa16.86■□□□□ 0.29
CTSD-206ENST00000497544 CYB5AP00167 134 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 TFAP2AP05549 437 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 GADD45AP24522 165 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 GIFP27352 417 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 CALRP27797 417 aaKnown RBP16.85■□□□□ 0.29
CTSD-206ENST00000497544 CFHR2P36980 270 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 POU3F4P49335 361 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 RIN1Q13671 783 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 TIMM50Q3ZCQ8 353 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 C22orf42Q6IC83 251 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 WDR82Q6UXN9 313 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 CALHM1Q8IU99 346 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 MKXQ8IYA7 352 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 C10orf105Q8TEF2 133 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 RFT1Q96AA3 541 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 TMIGD2Q96BF3 282 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 YIPF6Q96EC8 236 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 CHCHD6Q9BRQ6 235 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 PKIBQ9C010 78 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 PPIL3Q9H2H8 161 aaKnown RBP16.85■□□□□ 0.29
CTSD-206ENST00000497544 METTL17Q9H7H0 456 aaPredicted RBP16.85■□□□□ 0.29
CTSD-206ENST00000497544 SNTG1Q9NSN8 517 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 NPTNQ9Y639 398 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 ANK2Q01484 3957 aa16.85■□□□□ 0.29
CTSD-206ENST00000497544 LOC100506127A0A0U1RQW1 187 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 RHBDL1O75783 438 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 PLATP00750 562 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 FGF9P31371 208 aaPredicted RBP16.84■□□□□ 0.29
CTSD-206ENST00000497544 ZNF93P35789 620 aaPredicted RBP16.84■□□□□ 0.29
CTSD-206ENST00000497544 RBMXP38159 391 aaKnown RBP16.84■□□□□ 0.29
CTSD-206ENST00000497544 ALDH3B2P48448 385 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 IL24Q13007 206 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 HNRNPA0Q13151 305 aaKnown RBP16.84■□□□□ 0.29
CTSD-206ENST00000497544 DNM1P46Q6ZS02 220 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 SLC25A26Q70HW3 274 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 OR13F1Q8NGS4 319 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 Q96MF0 132 aa16.84■□□□□ 0.29
CTSD-206ENST00000497544 TXNL4BQ9NX01 149 aaKnown RBP16.84■□□□□ 0.29
CTSD-206ENST00000497544 PPIAL4EA0A075B759 164 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 PPIAL4DF5H284 164 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 SYNGR1O43759 233 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 PPIAL4FP0DN26 164 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 TMEM225BP0DP42 221 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 MYL9P24844 172 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 MPZP25189 248 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 RPL5P46777 297 aaKnown RBP16.83■□□□□ 0.28
CTSD-206ENST00000497544 PDZK1IP1Q13113 114 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 GPR141Q7Z602 305 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 CDH26Q8IXH8 852 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 GCSAMQ8N6F7 178 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 NKAIN3Q8N8D7 197 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 PNLDC1Q8NA58 520 aaKnown RBP16.83■□□□□ 0.28
CTSD-206ENST00000497544 BPESC1Q9GZL8 116 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 WIPI2Q9Y4P8 454 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 PPIAL4AQ9Y536 164 aa16.83■□□□□ 0.28
CTSD-206ENST00000497544 ANK3Q12955 4377 aaKnown RBP16.82■□□□□ 0.28
CTSD-206ENST00000497544 IGHV4-30-2A0A087WSY4 118 aa16.82■□□□□ 0.28
CTSD-206ENST00000497544 AKR7A2O43488 359 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms