RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PPA2Q9H2U2 334 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 OSGIN2Q9Y236 505 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 STARD10Q9Y365 291 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 FER1L5A0AVI2 2057 aa7.26□□□□□ -1.25
USP54-215ENST00000497106 IFNL4K9M1U5 179 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ERVH48-1M5A8F1 160 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 DEGS1O15121 323 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 FUT3P21217 361 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 GPM6AP51674 278 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 TAGLNQ01995 201 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 IL13RA2Q14627 380 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 SMCO1Q147U7 214 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 HAGHLQ6PII5 290 aaPredicted RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 FBXW12Q6X9E4 464 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ZNF611Q8N823 705 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 BHLHE23Q8NDY6 225 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 RNASE11Q8TAA1 199 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 BANF2Q9H503 90 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ASF1BQ9NVP2 202 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 NECAP2Q9NVZ3 263 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ERRFI1Q9UJM3 462 aaPredicted RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 RHBDD3Q9Y3P4 386 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 RGS13O14921 159 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 IFNA21P01568 189 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 CSN2P05814 226 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 GLI4P10075 376 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 COX5AP20674 150 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 GK2Q14410 553 aaPredicted RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 ZFP69Q49AA0 526 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 VHLLQ6RSH7 139 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 NRARPQ7Z6K4 114 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 SPSB4Q96A44 273 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ZNF837Q96EG3 531 aaPredicted RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 ZC3HAV1LQ96H79 300 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 ZNF69Q9UC07 566 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ST3GAL6Q9Y274 331 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 HSPA12AO43301 675 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 PDZK1IP1Q13113 114 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 COQ8AQ8NI60 647 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 SNRNP40Q96DI7 357 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 STARD4Q96DR4 205 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 REPIN1Q9BWE0 567 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 PPP1R3EQ9H7J1 279 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 NOX3Q9HBY0 568 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 IL36GQ9NZH8 169 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 MT-ND4P03905 459 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 GLAP06280 429 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 RBMXP38159 391 aaKnown RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 FABP6P51161 128 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 SFRP4Q6FHJ7 346 aaPredicted RBP7.25□□□□□ -1.25
USP54-215ENST00000497106 TRAT1Q6PIZ9 186 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 SEZ6L2Q6UXD5 910 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 CCDC28AQ8IWP9 274 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 ARRDC1Q8N5I2 433 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 OR6F1Q8NGZ6 308 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 CAPSLQ8WWF8 208 aa7.25□□□□□ -1.25
USP54-215ENST00000497106 TRAV6A0A075B6T7 132 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 HMX3A6NHT5 357 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 PDCD6O75340 191 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 HLA-DQB1P01920 261 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 TK1P04183 234 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 TCRBP04435 133 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 VSIG8P0DPA2 414 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 CCL2P13500 99 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ZNF35P13682 527 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 CA6P23280 308 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 GIFP27352 417 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 CEACAM8P31997 349 aaPredicted RBP7.24□□□□□ -1.25
USP54-215ENST00000497106 AGAP6Q5VW22 663 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 FAM58AQ8N1B3 248 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 OR4D6Q8NGJ1 314 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 S100PBPQ96BU1 408 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 SPACA5Q96QH8 159 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ST6GALNAC5Q9BVH7 336 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 PURGQ9UJV8 347 aaKnown RBP7.24□□□□□ -1.25
USP54-215ENST00000497106 FAM186AA6NE01 2351 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 A0A1W2PR80 420 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 FAM90A27PA6NNH2 459 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 SMPD2O60906 423 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ATG12O94817 140 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 ADRA2CP18825 462 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 PTH2RP49190 550 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 SNU13P55769 128 aaKnown RBP7.24□□□□□ -1.25
USP54-215ENST00000497106 GRK1Q15835 563 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 BAK1Q16611 211 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 SPATA46Q5T0L3 261 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 OLFML2AQ68BL7 652 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 IDO2Q6ZQW0 420 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 TMEM200AQ86VY9 491 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 FBXL14Q8N1E6 418 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 OR8G5Q8NG78 346 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 HRASLSQ9HDD0 168 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 NUDT15Q9NV35 164 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 AGFG2O95081 481 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 GRPP07492 148 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 GLRA1P23415 457 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 PAN3Q58A45 887 aaKnown RBP7.24□□□□□ -1.25
USP54-215ENST00000497106 ZFP57Q9NU63 452 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 EHFQ9NZC4 300 aa7.24□□□□□ -1.25
USP54-215ENST00000497106 TEX13DA0A0J9YY54 714 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms