RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 DNAJC13O75165 2243 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 KNTC1P50748 2209 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 A0A0D9SG52 128 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 CDK2AP1O14519 115 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SFT2D2O95562 160 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 RRASP10301 218 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 FUT6P51993 359 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 ATP1B3P54709 279 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 LRRC37A5PQ49AS3 106 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 C9orf135Q5VTT2 229 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 AADACL3Q5VUY0 350 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 PLCXD3Q63HM9 321 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 RFPL4BQ6ZWI9 263 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SLC51BQ86UW2 128 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 APH1AQ96BI3 265 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 SEC22AQ96IW7 307 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 IL36GQ9NZH8 169 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
GARNL3-220ENST00000496711 TNRC6AQ8NDV7 1962 aaKnown RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 PCNX2A6NKB5 2137 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 ACTL6AO96019 429 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 CD46P15529 392 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 AP2S1P53680 142 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 PPIAP62937 165 aaKnown RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 BAMBIQ13145 260 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 RNPS1Q15287 305 aaKnown RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 SURF2Q15527 256 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 TRIP6Q15654 476 aaKnown RBP11.31□□□□□ -0.6
GARNL3-220ENST00000496711 TAF9Q16594 264 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 NSUN5P2Q63ZY6 315 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 SIGIRRQ6IA17 410 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 ALKAL2Q6UX46 152 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 COLCA1Q6ZS62 124 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 OVCH2Q7RTZ1 564 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 PXT1Q8NFP0 134 aa11.31□□□□□ -0.6
GARNL3-220ENST00000496711 A0A096LPE4 126 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 A0A1W2PPZ6 126 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 RRP8O43159 456 aaKnown RBP11.3□□□□□ -0.6
GARNL3-220ENST00000496711 OR2F2O95006 317 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 COX5BP10606 129 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 CALCRP30988 508 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 ARPC4P59998 168 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
GARNL3-220ENST00000496711 OR2F1Q13607 317 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 RPUSD3Q6P087 351 aaKnown RBP11.3□□□□□ -0.6
GARNL3-220ENST00000496711 KCNRGQ8N5I3 272 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 ZFP62Q8NB50 900 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-220ENST00000496711 PIGCQ92535 297 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-220ENST00000496711 RDH8Q9NYR8 311 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 EDARQ9UNE0 448 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 FREM2Q5SZK8 3169 aa11.3□□□□□ -0.6
GARNL3-220ENST00000496711 IGKV1-12A0A0C4DH73 117 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 EEF1E1-BLOC1S5C9J1V9 151 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 IGKV1D-12P01611 117 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 PI3P19957 117 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 CHATP28329 748 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 SERPINF1P36955 418 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ECI1P42126 302 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 PDZK1IP1Q13113 114 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 SLC9A3R2Q15599 337 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 C3AR1Q16581 482 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ATP1A1-AS1Q5TC04 95 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 CLEC18BQ6UXF7 455 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 CCDC28AQ8IWP9 274 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 MCEMP1Q8IX19 187 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 OSR2Q8N2R0 312 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ZSCAN4Q8NAM6 433 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 COQ8AQ8NI60 647 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 THAP6Q8TBB0 222 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ACKR4Q9NPB9 350 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 KANTRA0A1W2PQU2 76 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 ARGFXA6NJG6 315 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 I3L521 148 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 BCL2L11O43521 198 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 SPDEFO95238 335 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 HLA-HP01893 362 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 CRHP06850 196 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 NMBP08949 121 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 DTYMKP23919 212 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 CD82P27701 267 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 FOXG1P55316 489 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 SUPT4H1P63272 117 aaKnown RBP11.29□□□□□ -0.6
GARNL3-220ENST00000496711 AANATQ16613 207 aa11.29□□□□□ -0.6
GARNL3-220ENST00000496711 NAXEQ8NCW5 288 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms