RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FREM3P0C091 2139 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PQD3 144 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 HELTA6NFD8 242 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 EIF4E2O60573 245 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 SLC16A7O60669 478 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 CDC14BO60729 498 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TNFSF15O95150 251 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 MT-CO3P00414 261 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 CPT2P23786 658 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 POLR2HP52434 150 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 POU3F1Q03052 451 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TRIP6Q15654 476 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM176BQ3YBM2 270 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 DHRS7BQ6IAN0 325 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 MRPL21Q7Z2W9 205 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 OR6N2Q8NGY6 317 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 GHSRQ92847 366 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PELI1Q96FA3 418 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 LOXL4Q96JB6 756 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TAAR6Q96RI8 345 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PCGF1Q9BSM1 259 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM43Q9BTV4 400 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 RGCCQ9H4X1 137 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PROK2Q9HC23 129 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 C19orf25Q9UFG5 118 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 SMPXQ9UHP9 88 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PPP1R3CQ9UQK1 317 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 EXOSC1Q9Y3B2 195 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 STRAPQ9Y3F4 350 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 RBM7Q9Y580 266 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PHF3Q92576 2039 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TRAV36DV7A0A075B6V5 113 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 LOC102723996A0A087X1L8 192 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 LOC101059948A0A1B0GTJ6 334 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1B0GV72 72 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PQ09 198 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 A8MVM7 634 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 GABRPO00591 440 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 CASKO14936 926 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ARPC3O15145 178 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 FABP7O15540 132 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 CYB5BO43169 146 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 FZD7O75084 574 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TXNDC12O95881 172 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 RFPL3SP0C7P2 107 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 FOLR2P14207 255 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 DAOP14920 347 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 CD82P27701 267 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 DLSTP36957 453 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SLC6A8P48029 635 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 RORCP51449 518 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 NANOS3P60323 173 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ARF6P62330 175 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 OC90Q02509 493 aaPredicted RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 MYBPHQ13203 477 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 MFAP5Q13361 173 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TPBGQ13641 420 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 PMS2P11Q13670 270 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 NTRK2Q16620 822 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 CARD17Q5XLA6 110 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 MOGAT3Q86VF5 341 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 OR1L6Q8NGR2 347 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 NEIL3Q8TAT5 605 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SETD6Q8TBK2 473 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 THEM6Q8WUY1 208 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM234Q8WY98 164 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SPSB4Q96A44 273 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 OR5B2Q96R09 309 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 URM1Q9BTM9 101 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TPPP3Q9BW30 176 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 WDR54Q9H977 334 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 PLA2G3Q9NZ20 509 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 KLHL13Q9P2N7 655 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 COMMD3Q9UBI1 195 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 FARSAQ9Y285 508 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ITPR3Q14573 2671 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 IGF2RP11717 2491 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 PCSK5Q92824 1860 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 A0A1W2PPV4 95 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 FTCDNL1E5RQL4 147 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF670-ZNF695F2Z2N8 137 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 MS4A18H0YCH9 400 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 M0QZ24 198 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 SIVA1O15304 175 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ZNHIT1O43257 154 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 C1QL1O75973 258 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 OR6A2O95222 327 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 GABRA1P14867 456 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 RAB5CP51148 216 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 DLX5P56178 289 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TLE3Q04726 772 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 PLPPR5Q32ZL2 321 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 MS4A18Q3C1V0 323 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 DMRTC1Q5HYR2 192 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 UNQ9370/PRO34162Q6UXP9 181 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 LINC00696Q6ZRV3 163 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM144Q7Z5S9 345 aa5.42□□□□□ -1.54
SSBP1-213ENST00000496622 YRDCQ86U90 279 aaKnown RBP5.42□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF573Q86YE8 665 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms