RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 FAM76BQ5HYJ3 339 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 TMEM42Q69YG0 159 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 FAM90A1Q86YD7 464 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 C11orf53Q8IXP5 236 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
SF3A1-209ENST00000496189 PDCD1LG2Q9BQ51 273 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 TMPRSS13Q9BYE2 586 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 YTHDF1Q9BYJ9 559 aaKnown RBP13.67□□□□□ -0.22
SF3A1-209ENST00000496189 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
SF3A1-209ENST00000496189 LOC105371242A0A075B767 164 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 A6NIN4 97 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 AKR7A2O43488 359 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 ENSAO43768 121 aaKnown RBP13.66□□□□□ -0.22
SF3A1-209ENST00000496189 HAAOP46952 286 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-209ENST00000496189 HAGHLQ6PII5 290 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-209ENST00000496189 LYPD2Q6UXB3 125 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 PRSS48Q7RTY5 328 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 C1QL2Q7Z5L3 287 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF485Q8NCK3 441 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 GPR148Q8TDV2 347 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 RAB40AQ8WXH6 277 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 TMIGD2Q96BF3 282 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 FGGYQ96C11 551 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 SMIM19Q96E16 107 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 CHST5Q9GZS9 411 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 OR51I2Q9H344 312 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 PAK1IP1Q9NWT1 392 aaPredicted RBP13.66□□□□□ -0.22
SF3A1-209ENST00000496189 ZNF281Q9Y2X9 895 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 INSIG2Q9Y5U4 225 aa13.66□□□□□ -0.22
SF3A1-209ENST00000496189 IGHV3OR15-7A0A075B7D8 119 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 IGHV2-70DA0A0C4DH43 119 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 TRAPPC2LH3BP13 241 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 J3QT63 122 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 MRPS14O60783 128 aaKnown RBP13.65□□□□□ -0.22
SF3A1-209ENST00000496189 CD2P06729 351 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 EGR1P18146 543 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 GABARAPL2P60520 117 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 BDH1Q02338 343 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 SPHARQ15513 63 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 C11orf91Q3C1V1 193 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 PNLDC1Q8NA58 520 aaKnown RBP13.65□□□□□ -0.22
SF3A1-209ENST00000496189 AQP3Q92482 292 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 BORCS8Q96FH0 119 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 MED30Q96HR3 178 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 NUDT16L1Q9BRJ7 211 aaKnown RBP13.65□□□□□ -0.22
SF3A1-209ENST00000496189 DNTTIP1Q9H147 329 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 RASL12Q9NYN1 266 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 KAAG1Q9UBP8 84 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 JMJD1CQ15652 2540 aa13.65□□□□□ -0.22
SF3A1-209ENST00000496189 FAM230AA0A1W2PPH8 454 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 KIAA1324LA8MWY0 1029 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 NDUFB3O43676 98 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 TCF21O43680 179 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ECDO95905 644 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 CYB5AP00167 134 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 LIPFP07098 398 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 PRKACBP22694 351 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 FPR2P25090 351 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 FUT6P51993 359 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ACSM1Q08AH1 577 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 MED22Q15528 200 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 SMIM21Q3B7S5 101 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 YIF1BQ5BJH7 314 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 DMKNQ6E0U4 476 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 UTS2BQ765I0 119 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 SERPINA12Q8IW75 414 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 OR5D14Q8NGL3 314 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 TRMT10AQ8TBZ6 339 aaKnown RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 RPS4Y2Q8TD47 263 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ZNF418Q8TF45 676 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ST8SIA4Q92187 359 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 GHSRQ92847 366 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ADAT3Q96EY9 351 aaPredicted RBP13.64□□□□□ -0.23
SF3A1-209ENST00000496189 MMP26Q9NRE1 261 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 NLKQ9UBE8 527 aa13.64□□□□□ -0.23
SF3A1-209ENST00000496189 ANK3Q12955 4377 aaKnown RBP13.63□□□□□ -0.23
SF3A1-209ENST00000496189 PQLC2LA1A4F0 135 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 DVL1O14640 695 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 GPR37O15354 613 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 LALBAP00709 142 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 MT-ND2P03891 347 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 CELP19835 753 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 EPHA1P21709 976 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 ATP1B3P54709 279 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 IL13RA1P78552 427 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 HOXA4Q00056 320 aaPredicted RBP13.63□□□□□ -0.23
SF3A1-209ENST00000496189 IRF3Q14653 427 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 DMRTC1Q5HYR2 192 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 BPIFB2Q8N4F0 458 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 OR51A4Q8NGJ6 313 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 OR10AC1Q8NH08 325 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 NPRL2Q8WTW4 380 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 TMEM158Q8WZ71 300 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 SGCDQ92629 289 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 THRSPQ92748 146 aa13.63□□□□□ -0.23
SF3A1-209ENST00000496189 SPSB1Q96BD6 273 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms