RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 VNN3Q9NY84 501 aa10.71□□□□□ -0.69
COL1A1-209ENST00000495677 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
COL1A1-209ENST00000495677 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.69
COL1A1-209ENST00000495677 CDH10Q9Y6N8 788 aa10.71□□□□□ -0.69
COL1A1-209ENST00000495677 DNAH7Q8WXX0 4024 aa10.71□□□□□ -0.7
COL1A1-209ENST00000495677 LYSTQ99698 3801 aa10.71□□□□□ -0.7
COL1A1-209ENST00000495677 K7N7A8 449 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 SEMG1P04279 462 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 PGA5P0DJD9 388 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 NCK1P16333 377 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 MYCNOSP40205 109 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 MAP2K3P46734 347 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 GP2P55259 537 aaKnown RBP10.7□□□□□ -0.7
COL1A1-209ENST00000495677 GFOD2Q3B7J2 385 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 GLYATQ6IB77 296 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 OSR2Q8N2R0 312 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 P2RX4Q99571 388 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 EGLN3Q9H6Z9 239 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 BRD7Q9NPI1 651 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
COL1A1-209ENST00000495677 GYPBP06028 91 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 LPLP06858 475 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 H2BFMP0C1H6 154 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 ATP6V1B1P15313 513 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 CHATP28329 748 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 CEBPDP49716 269 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-209ENST00000495677 HMGA2P52926 109 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 SLC34A1Q06495 639 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 IL18R1Q13478 541 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 CRMP1Q14194 572 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 LCN1P1Q5VSP4 162 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 HAGHLQ6PII5 290 aaPredicted RBP10.69□□□□□ -0.7
COL1A1-209ENST00000495677 C10orf99Q6UWK7 81 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 HACD2Q6Y1H2 254 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 RASSF6Q6ZTQ3 369 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 PYURFQ96I23 114 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 RBM14Q96PK6 669 aaKnown RBP10.69□□□□□ -0.7
COL1A1-209ENST00000495677 INTS14Q96SY0 518 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 NIPAL2Q9H841 368 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 GORASP2Q9H8Y8 452 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 HES4Q9HCC6 221 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 ZFP57Q9NU63 452 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 ABCD2Q9UBJ2 740 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 BAIAP2Q9UQB8 552 aa10.69□□□□□ -0.7
COL1A1-209ENST00000495677 LCE6AA0A183 80 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 AMY1AP04745 511 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 AMY2AP04746 511 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 CCDC159P0C7I6 412 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 CLUP10909 449 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 JUNBP17275 347 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ACTA2P62736 377 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ACTG2P63267 376 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ACTC1P68032 377 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ACTA1P68133 377 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-209ENST00000495677 DYNC1I2Q13409 638 aaKnown RBP10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ABCA11PQ4W5N1 156 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 CEP78Q5JTW2 689 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 ZBTB49Q6ZSB9 765 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-209ENST00000495677 LINC00471Q8N535 108 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 OR6K6Q8NGW6 343 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 OR6N2Q8NGY6 317 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 AMELYQ99218 206 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 KCTD14Q9BQ13 255 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-209ENST00000495677 NRIP2Q9BQI9 281 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 EFCAB1Q9HAE3 211 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 TBC1D23Q9NUY8 699 aa10.68□□□□□ -0.7
COL1A1-209ENST00000495677 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 A0A0U1RQV5 110 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 M0QZK8 103 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 OR2F2O95006 317 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 HTR1DP28221 377 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 BRS3P32247 399 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 RPL23AP62750 156 aaKnown RBP10.67□□□□□ -0.7
COL1A1-209ENST00000495677 KHDC1LQ5JSQ8 128 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 OR8B12Q8NGG6 310 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 OR8D4Q8NGM9 314 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 CAPSLQ8WWF8 208 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 TFAP2CQ92754 450 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 SLC25A33Q9BSK2 321 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 HHLA2Q9UM44 414 aa10.67□□□□□ -0.7
COL1A1-209ENST00000495677 PSMB11A5LHX3 300 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 ZNF737O75373 536 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 KRT36O76013 467 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 IGLV3-1P01715 115 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 LYNP07948 512 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 PIPP12273 146 aaPredicted RBP10.66□□□□□ -0.7
COL1A1-209ENST00000495677 MPZP25189 248 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 RRM2P31350 389 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
COL1A1-209ENST00000495677 ERVK11-1P61568 191 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 ZNF573Q86YE8 665 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 ERI1Q8IV48 349 aaKnown RBP10.66□□□□□ -0.7
COL1A1-209ENST00000495677 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 OTOSQ8NHW6 89 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 NDNFQ8TB73 568 aa10.66□□□□□ -0.7
COL1A1-209ENST00000495677 STMN2Q93045 179 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms