RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 CEP19Q96LK0 163 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 SP140LQ9H930 580 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 IKZF2Q9UKS7 526 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF281Q9Y2X9 895 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 LOC105371242A0A075B767 164 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 A0A0A6YYJ9 748 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 GGT3PA6NGU5 568 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 CTDSP2O14595 271 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 GMDSO60547 372 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 CYB5R3P00387 301 aaPredicted RBP11.05□□□□□ -0.64
ERCC3-209ENST00000494464 CA6P23280 308 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 TNFSF8P32971 234 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 DDOSTP39656 456 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 CCR9P51686 369 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 NANOS3P60323 173 aaKnown RBP11.05□□□□□ -0.64
ERCC3-209ENST00000494464 PPP3R1P63098 170 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 LCN2P80188 198 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 OR8G1Q15617 311 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 RGS21Q2M5E4 152 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 ESCO2Q56NI9 601 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 DDI2Q5TDH0 399 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 DEGS2Q6QHC5 323 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 SPATC1Q76KD6 591 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 PRSS45Q7RTY3 260 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 PARP16Q8N5Y8 322 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 PLPP7Q8NBV4 271 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 OR56B2PQ8NGI1 322 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 THEM6Q8WUY1 208 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 THRSPQ92748 146 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 AMELYQ99218 206 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 CCDC32Q9BV29 185 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 OCEL1Q9H607 264 aa11.05□□□□□ -0.64
ERCC3-209ENST00000494464 TMEM212A6NML5 194 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 TMEM127O75204 238 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF254O75437 659 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 UPK1BO75841 260 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ZFPL1O95159 310 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 FSHBP01225 129 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ANXA2P07355 339 aaKnown RBP11.04□□□□□ -0.64
ERCC3-209ENST00000494464 IRF2P14316 349 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
ERCC3-209ENST00000494464 MAPK3P27361 379 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-209ENST00000494464 PMELP40967 661 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF121P58317 390 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-209ENST00000494464 SEC61A1P61619 476 aaKnown RBP11.04□□□□□ -0.64
ERCC3-209ENST00000494464 MZT2AQ6P582 158 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 LAX1Q8IWV1 398 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 SPERTQ8NA61 448 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 DEFB108BQ8NET1 73 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 OR11L1Q8NGX0 322 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 PDCD1LG2Q9BQ51 273 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 MROQ9BYG7 248 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 TMEM165Q9HC07 324 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 MIOXQ9UGB7 285 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 OPN4Q9UHM6 478 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 PPIAL4AQ9Y536 164 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 V9GYH0 126 aa11.04□□□□□ -0.64
ERCC3-209ENST00000494464 A0A0G2JK05 382 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 IGHV3-64DA0A0J9YX35 117 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 TRBV5-5A0A0J9YX44 114 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 hCG_38984A0A1B0GV85 526 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR4C45A6NMZ5 311 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 RGS5O15539 181 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 TBX1O43435 398 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 WNT2P09544 360 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 H2BFMP0C1H6 154 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 RPS2P15880 293 aaKnown RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 EPHA1P21709 976 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 PSMA6P60900 246 aaKnown RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 FAM3AP98173 230 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 MZT1Q08AG7 82 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 HSD17B12Q53GQ0 312 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 Q6ZNX1 250 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 SEMA6DQ8NFY4 1073 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR13C5Q8NGS8 318 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR2G2Q8NGZ5 317 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR5AK2Q8NH90 309 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 NANPQ8TBE9 248 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 RGP1Q92546 391 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 REEP6Q96HR9 211 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 TMEM246Q9BRR3 403 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 COMMD4Q9H0A8 199 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 PPIL3Q9H2H8 161 aaKnown RBP11.03□□□□□ -0.64
ERCC3-209ENST00000494464 MIXL1Q9H2W2 232 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 RGCCQ9H4X1 137 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 C7orf69Q9H7B7 122 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 NIPAL2Q9H841 368 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 FN3KRPQ9HA64 309 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 FRRS1LQ9P0K9 344 aa11.03□□□□□ -0.64
ERCC3-209ENST00000494464 OR5V1Q9UGF6 321 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms