RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CMTM8Q8IZV2 173 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 OR9G4Q8NGQ1 327 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 CACNG8Q8WXS5 425 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 C9orf16Q9BUW7 83 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 LINC00574Q9H8X3 128 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 MRM3Q9HC36 420 aaKnown RBP2.29□□□□□ -2.04
SSB-212ENST00000494051 VCX3AQ9NNX9 186 aa2.29□□□□□ -2.04
SSB-212ENST00000494051 MRPL40Q9NQ50 206 aaKnown RBP2.29□□□□□ -2.04
SSB-212ENST00000494051 MYEF2Q9P2K5 600 aaKnown RBP2.29□□□□□ -2.04
SSB-212ENST00000494051 FARSAQ9Y285 508 aaKnown RBP2.29□□□□□ -2.04
SSB-212ENST00000494051 IGKV1-27A0A075B6S5 117 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 A6NDN8 102 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 MGAT4DA6NG13 374 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 ZNF878C9JN71 531 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 SMLR1H3BR10 107 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 H7C0C1 242 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 M0R3G1 203 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 HUS1O60921 280 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 PSIP1O75475 530 aaKnown RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 SCELO95171 688 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 LSM8O95777 96 aaKnown RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 HLA-DRAP01903 254 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 PET100P0DJ07 73 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 RD3LP0DJH9 198 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 PMCHP20382 165 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 SYT1P21579 422 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 HOXA6P31267 233 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 CD70P32970 193 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 ZNF121P58317 390 aaPredicted RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 MLF1P58340 268 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 LCN2P80188 198 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 ITIH4Q14624 930 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 C18orf21Q32NC0 220 aaPredicted RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 HCP5Q6MZN7 132 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 TBPL2Q6SJ96 375 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 MRPL21Q7Z2W9 205 aaKnown RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 SCD5Q86SK9 330 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 ITPRIPQ8IWB1 547 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 INO80EQ8NBZ0 244 aaPredicted RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 C19orf18Q8NEA5 215 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 OR2Z1Q8NG97 314 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 OR8J2Q8NGG1 315 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 TCP10LQ8TDR4 215 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 RNF170Q96K19 258 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 BTN2A3PQ96KV6 586 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 C18orf15Q96N68 181 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 DCUN1D5Q9BTE7 237 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 TMEM38AQ9H6F2 299 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 RRAGDQ9NQL2 400 aaPredicted RBP2.28□□□□□ -2.04
SSB-212ENST00000494051 AGPAT4Q9NRZ5 378 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 ADA2Q9NZK5 511 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 POFUT2Q9Y2G5 429 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 PPIL1Q9Y3C6 166 aa2.28□□□□□ -2.04
SSB-212ENST00000494051 PUS1Q9Y606 427 aaKnown RBP eCLIP2.28□□□□□ -2.04
SSB-212ENST00000494051 ZNF407Q9C0G0 2248 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 LRPPRCP42704 1394 aaKnown RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 TSPOAP1O95153 1857 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 NLRC5Q86WI3 1866 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 IGHV3OR16-9A0A0B4J2B5 98 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 CENPXA8MT69 81 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 GOLGA6L19H0YKK7 550 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 RFXANKO14593 260 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 ITGB1BP1O14713 200 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 SLC9A3R1O14745 358 aaPredicted RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 SIVA1O15304 175 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 RPP14O95059 124 aaKnown RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 ETHE1O95571 254 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 HPRT1P00492 218 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 MLNP12872 115 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 BCKDHBP21953 392 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 CD82P27701 267 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 PSMB6P28072 239 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 HTR1DP28221 377 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 CDKN2CP42773 168 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 KCNJ3P48549 501 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 ATP5J2P56134 94 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 UBE2KP61086 200 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 RAB14P61106 215 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 MRPS25P82663 173 aaKnown RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 REEP5Q00765 189 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 IHHQ14623 411 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 VAMP3Q15836 100 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 RGS21Q2M5E4 152 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 HSDL1Q3SXM5 330 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 DNAL1Q4LDG9 190 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 DEFB134Q4QY38 66 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 TTC33Q6PID6 262 aaPredicted RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 OPN5Q6U736 354 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 FAM151BQ6UXP7 276 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 SLC35D2Q76EJ3 337 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 PID1Q7Z2X4 250 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 AKAP14Q86UN6 197 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 CRLF3Q8IUI8 442 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 RERGQ96A58 199 aaPredicted RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 JSRP1Q96MG2 331 aaPredicted RBP2.27□□□□□ -2.05
SSB-212ENST00000494051 CSPG4P5Q96PW8 444 aa2.27□□□□□ -2.05
SSB-212ENST00000494051 ANKHQ9HCJ1 492 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms