RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
VCP-207ENST00000493886 A0A0U1RQV5 110 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 M0R135 149 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 DBHP09172 617 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 HRH1P35367 487 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 GLIPR1L1Q6UWM5 242 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 OVCH2Q7RTZ1 564 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 OR6K3Q8NGY3 331 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 COMMD9Q9P000 198 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 ABI3Q9P2A4 366 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 IL17BQ9UHF5 180 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 MED6O75586 246 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 RFC3P40938 356 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 UNQ6126/PRO20091Q6UXV3 157 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 GPR137CQ8N3F9 429 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 PXT1Q8NFP0 134 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 CPNE4Q96A23 557 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 MRPS24Q96EL2 167 aaKnown RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 ALKBH3Q96Q83 286 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 NICN1Q9BSH3 213 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 HES7Q9BYE0 225 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 PRR13Q9NZ81 148 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 IGKV1-9A0A0C4DH69 117 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 SCGNO76038 276 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 FBP1P09467 338 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 SMIM6P0DI80 62 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 OR3A4PP47883 348 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 EIF2S3LQ2VIR3 472 aaKnown RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 ADAD2Q8NCV1 583 aaKnown RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 CPT1CQ8TCG5 803 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 SPTSSAQ969W0 71 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 SLC25A21Q9BQT8 299 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 ZNF703Q9H7S9 590 aaPredicted RBP12.04□□□□□ -0.48
VCP-207ENST00000493886 TMEM38BQ9NVV0 291 aa12.04□□□□□ -0.48
VCP-207ENST00000493886 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 PCNX2A6NKB5 2137 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 CYTIPO60759 359 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 DHRS3O75911 302 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 OR1C1Q15619 314 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 MPPED2Q15777 294 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 OR2W3Q7Z3T1 314 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 ZFP82Q8N141 532 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
VCP-207ENST00000493886 GPER1Q99527 375 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
VCP-207ENST00000493886 TAS2R3Q9NYW6 316 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 PMP2P02689 132 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 CD74P04233 296 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 MELTFP08582 738 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 CST2P09228 141 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 IL13RA1P78552 427 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 RAB35Q15286 201 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 DTX1Q86Y01 620 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 OR10R2Q8NGX6 335 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 SSC4DQ8WTU2 575 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 PLA2G3Q9NZ20 509 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 B4GALT7Q9UBV7 327 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 V9GYS6 101 aa12.03□□□□□ -0.48
VCP-207ENST00000493886 OR2AT4A6NND4 320 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 ABCD4O14678 606 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 B4GALT1P15291 398 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 PI3P19957 117 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 THBS4P35443 961 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 GSK3AP49840 483 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 ECH1Q13011 328 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.48
VCP-207ENST00000493886 TMEM95Q3KNT9 176 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 SULF2Q8IWU5 870 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 TMEM104Q8NE00 496 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 NUDT16L1Q9BRJ7 211 aaKnown RBP12.02□□□□□ -0.48
VCP-207ENST00000493886 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.48
VCP-207ENST00000493886 A0A1W2PP11 408 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 DISC1C4P0D8 188 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 SYNGR3O43761 229 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 MPIG6BO95866 241 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 CELA3AP09093 270 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 MGMTP16455 207 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 CRYGSP22914 178 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 FGL1Q08830 312 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 KCNG3Q8TAE7 436 aa12.02□□□□□ -0.49
VCP-207ENST00000493886 ALX4Q9H161 411 aaPredicted RBP12.02□□□□□ -0.49
VCP-207ENST00000493886 RNF222A6NCQ9 220 aa12.01□□□□□ -0.49
VCP-207ENST00000493886 OR14I1A6ND48 311 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms