RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SSH2Q76I76 1423 aa1.39□□□□□ -2.19
ITGB1-216ENST00000493758 MROH7Q68CQ1 1323 aa1.39□□□□□ -2.19
ITGB1-216ENST00000493758 TRAV8-6A0A0B4J262 113 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 LRRIQ4A6NIV6 560 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 SLC22A20A6NK97 555 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 ZBTB5O15062 677 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 PTHLHP12272 177 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 CBR1P16152 277 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 RAB11AP62491 216 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 GABRA6Q16445 453 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 PCOTHQ58A44 107 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 Q6ZQT7 251 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 SLC7A5P1Q8MH63 180 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 EIF4E3Q8N5X7 224 aaKnown RBP1.38□□□□□ -2.19
ITGB1-216ENST00000493758 C11orf70Q9BRQ4 267 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 ARV1Q9H2C2 271 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 TMEM38BQ9NVV0 291 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 TBC1D24Q9ULP9 559 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 TRAPPC1Q9Y5R8 145 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 VWDEQ8N2E2 1590 aa1.38□□□□□ -2.19
ITGB1-216ENST00000493758 CTAGE15A4D2H0 777 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 IGHMP01871 453 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 PRB1P04280 392 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 SLC1A2P43004 574 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 TUFMP49411 452 aaKnown RBP1.37□□□□□ -2.19
ITGB1-216ENST00000493758 NUDT2P50583 147 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 DNAJC3Q13217 504 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 RCN1Q15293 331 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 CTAGE6Q86UF2 777 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 ZDHHC22Q8N966 263 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 ISG20Q96AZ6 181 aaKnown RBP1.37□□□□□ -2.19
ITGB1-216ENST00000493758 PPP1R36Q96LQ0 422 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 ZNF75AQ96N20 296 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 HIGD2AQ9BW72 106 aa1.37□□□□□ -2.19
ITGB1-216ENST00000493758 COL11A1P12107 1806 aaPredicted RBP1.37□□□□□ -2.19
ITGB1-216ENST00000493758 PCNTO95613 3336 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 A0A1B0GU33 70 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CTAG2O75638 210 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 LCA5LO95447 670 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CXorf1O96002 111 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CTSGP08311 255 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 SEC11BP0C7V7 166 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CD82P27701 267 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 GNRHRP30968 328 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 GPR1P46091 355 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 SLC35A1P78382 337 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 BEX3Q00994 111 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CUL2Q13617 745 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 ZNF181Q2M3W8 571 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 KCTD16Q68DU8 428 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 FAM43BQ6ZT52 329 aaPredicted RBP1.36□□□□□ -2.19
ITGB1-216ENST00000493758 BPIFB6Q8NFQ5 453 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 THTPAQ9BU02 230 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 ZNF443Q9Y2A4 671 aaPredicted RBP1.36□□□□□ -2.19
ITGB1-216ENST00000493758 ENPP4Q9Y6X5 453 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 CACNA1AO00555 2505 aa1.36□□□□□ -2.19
ITGB1-216ENST00000493758 TRAV8-4A0A0B4J246 113 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 TRAV25A0A0B4J276 109 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 K7EPK0 472 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 P01737 135 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 C2orf54Q08AI8 447 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 LGALSLQ3ZCW2 172 aaPredicted RBP1.35□□□□□ -2.19
ITGB1-216ENST00000493758 Q6ZS52 159 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 LYPD6Q86Y78 171 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 MICU2Q8IYU8 434 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 OFCC1Q8IZS5 231 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 LINC00337Q8N6G1 96 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 INO80EQ8NBZ0 244 aaPredicted RBP1.35□□□□□ -2.19
ITGB1-216ENST00000493758 TMEM234Q8WY98 164 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 TNFRSF14Q92956 283 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 RBPMSQ93062 196 aaKnown RBP1.35□□□□□ -2.19
ITGB1-216ENST00000493758 SPACA5Q96QH8 159 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 ZC4H2Q9NQZ6 224 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 TMEM106BQ9NUM4 274 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 TMEM100Q9NV29 134 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 ACOT9Q9Y305 439 aa1.35□□□□□ -2.19
ITGB1-216ENST00000493758 IGHV3-21A0A0B4J1V1 117 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 IGHV3-43A0A0B4J1X8 118 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 IGHV2OR16-5A0A0B4J2B6 119 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 H3BN98 237 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 ZNF701M0R085 212 aaPredicted RBP1.34□□□□□ -2.19
ITGB1-216ENST00000493758 OVOL1O14753 267 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 PRPS1L1P21108 318 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 HTR2BP41595 481 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 LGALS7P47929 136 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 MTPNP58546 118 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 IRF8Q02556 426 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 TPRG1LQ5T0D9 272 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 FAM231DQ6ZW35 169 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 ITPRIPQ8IWB1 547 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 KIF2BQ8N4N8 673 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 Q8NAQ8 132 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 CCDC148Q8NFR7 591 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 ZFAND1Q8TCF1 268 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 BPIFA3Q9BQP9 254 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 TSGA10Q9BZW7 698 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 KLF12Q9Y4X4 402 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 ICOSQ9Y6W8 199 aa1.34□□□□□ -2.19
ITGB1-216ENST00000493758 UTRNP46939 3433 aa1.33□□□□□ -2.2
ITGB1-216ENST00000493758 HACD1B0YJ81 288 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms