RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CCNB2	O95067	398 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	TXNDC12	O95881	172 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ARG1	P05089	322 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SPARC	P09486	303 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	PGA5	P0DJD9	388 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ARSB	P15848	533 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	MUC1	P15941	1255 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	AMY2B	P19961	511 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	VAMP1	P23763	118 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	CD24	P25063	80 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	TGM4	P49221	684 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	DYNLT3	P51808	116 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	GRB2	P62993	217 aa	Known RBP	4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC35B1	P78383	322 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	CBX1	P83916	185 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	FHL1	Q13642	323 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	GK3P	Q14409	553 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	PCK2	Q16822	640 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	TMEM65	Q6PI78	240 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	DRAM2	Q6UX65	266 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ACP7	Q6ZNF0	438 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	FOXL2NB	Q6ZUU3	175 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SHF	Q7M4L6	423 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	C16orf82	Q7Z2V1	217 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	OR11H1	Q8NG94	326 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	OR5T2	Q8NGG2	359 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	OR6Q1	Q8NGQ2	317 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	FANK1	Q8TC84	345 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	CHPT1	Q8WUD6	406 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SLCO4A1	Q96BD0	722 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SEH1L	Q96EE3	360 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC25A33	Q9BSK2	321 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	COPS4	Q9BT78	406 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	LIN7B	Q9HAP6	207 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	RPRD1B	Q9NQG5	326 aa	Known RBP	4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	CENPM	Q9NSP4	180 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	CMTM6	Q9NX76	183 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	NDUFAF4	Q9P032	175 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	LINC00527	Q9UJ94	153 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	B9D1	Q9UPM9	204 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	SIGLEC7	Q9Y286	467 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ARL2BP	Q9Y2Y0	163 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ADAM18	Q9Y3Q7	739 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	TBL2	Q9Y4P3	447 aa	Known RBP	4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	HILPDA	Q9Y5L2	63 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	N6AMT1	Q9Y5N5	214 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	LRP1B	Q9NZR2	4599 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM90A22P	A8MWA6	464 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	C12orf77	C9JDV5	145 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602		J3KTA2	159 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	FXYD1	O00168	92 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TNFRSF11B	O00300	401 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF593	O00488	134 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	BHLHE40	O14503	412 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	FFAR1	O14842	300 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	SHOX	O15266	292 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	GSC2	O15499	205 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	XRCC2	O43543	280 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	E2F6	O75461	281 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	CDK2AP2	O75956	126 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	HMGN1	P05114	100 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	RPLP1	P05386	114 aa	Known RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	DBH	P09172	617 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	RBMY1C	P0DJD4	496 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	NCK1	P16333	377 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	CTLA4	P16410	223 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF3	P17036	446 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	CA6	P23280	308 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	CDKN2A	P42771	156 aa	Known RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	OR12D2	P58182	307 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	GABPB1	Q06547	395 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TRAP1	Q12931	704 aa	Known RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TSPAN31	Q12999	210 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	DGUOK	Q16854	277 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TIGD6	Q17RP2	521 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	LDLRAD2	Q5SZI1	272 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC35F1	Q5T1Q4	408 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	DHFR2	Q86XF0	187 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZDHHC21	Q8IVQ6	265 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TIGD4	Q8IY51	512 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	COMMD1	Q8N668	190 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	LRRC75A	Q8NAA5	344 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	CSNK2A3	Q8NEV1	391 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	OR2T33	Q8NG76	320 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	OR4K13	Q8NH42	304 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	LRRC29	Q8WV35	223 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	STMN2	Q93045	179 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	MED30	Q96HR3	178 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	GPX7	Q96SL4	187 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	NMNAT3	Q96T66	252 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	MYCBP	Q99417	103 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	MICU1	Q9BPX6	476 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ADAT1	Q9BUB4	502 aa	Known RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TMED9	Q9BVK6	235 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	OR10A2	Q9H208	303 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	RGCC	Q9H4X1	137 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TUBA4B	Q9H853	241 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms