RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 MPZL2O60487 215 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 ACAA1P09110 424 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-209ENST00000492270 UBCP0CG48 685 aaKnown RBP20.36■□□□□ 0.85
UPF3A-209ENST00000492270 PGA5P0DJD9 388 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 LRRC36Q1X8D7 754 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 C11orf91Q3C1V1 193 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 GPR157Q5UAW9 335 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 ACP7Q6ZNF0 438 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 LHFPL3Q86UP9 236 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 ANGPTL5Q86XS5 388 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 ZNF573Q86YE8 665 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 H1FXQ92522 213 aaKnown RBP20.36■□□□□ 0.85
UPF3A-209ENST00000492270 PELI1Q96FA3 418 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 C4orf36Q96KX1 117 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 DCTN5Q9BTE1 182 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 ELL3Q9HB65 397 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-209ENST00000492270 FRRS1LQ9P0K9 344 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 SLC25A10Q9UBX3 287 aaPredicted RBP20.36■□□□□ 0.85
UPF3A-209ENST00000492270 PCDHGB1Q9Y5G3 927 aa20.36■□□□□ 0.85
UPF3A-209ENST00000492270 CENPVL3A0A0U1RRI6 287 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 FAM230AA0A1W2PPH8 454 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 J3QLW9 94 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 ZNF19P17023 458 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 LPCAT4Q643R3 524 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 KCTD20Q7Z5Y7 419 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 ZNRF1Q8ND25 227 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 MED30Q96HR3 178 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 ALG8Q9BVK2 526 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 CHST5Q9GZS9 411 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 CNTD2Q9H8S5 307 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 ONECUT1Q9UBC0 465 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 MAB21L2Q9Y586 359 aa20.35■□□□□ 0.85
UPF3A-209ENST00000492270 IGKV1-27A0A075B6S5 117 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 ANKRD65E5RJM6 399 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 HTR1AP08908 422 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 MPZP25189 248 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 CEBPDP49716 269 aaPredicted RBP20.34■□□□□ 0.85
UPF3A-209ENST00000492270 BAMBIQ13145 260 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 RCN1Q15293 331 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 FDX2Q6P4F2 183 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 OR10AC1Q8NH08 325 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 LHX4Q969G2 390 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 Q96MT0 163 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 ISG20L2Q9H9L3 353 aaKnown RBP20.34■□□□□ 0.85
UPF3A-209ENST00000492270 RASL12Q9NYN1 266 aa20.34■□□□□ 0.85
UPF3A-209ENST00000492270 CLIC3O95833 236 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 IGHA1P01876 353 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 NDUFB7P17568 137 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 PEX2P28328 305 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 ACTA2P62736 377 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 ACTG2P63267 376 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 GALEQ14376 348 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 SMN1Q16637 294 aaKnown RBP20.33■□□□□ 0.85
UPF3A-209ENST00000492270 DEFB112Q30KQ8 113 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 VMO1Q7Z5L0 202 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 PDZD9Q8IXQ8 264 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 CD177Q8N6Q3 437 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 CCDC54Q8NEL0 328 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 ZNF555Q8NEP9 628 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 TMEM185AQ8NFB2 350 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 OR52I1Q8NGK6 324 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 C8orf46Q8TAG6 207 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 ADAT3Q96EY9 351 aaPredicted RBP20.33■□□□□ 0.85
UPF3A-209ENST00000492270 RDH12Q96NR8 316 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 NRIP2Q9BQI9 281 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 ZNF649Q9BS31 505 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 SLC7A11Q9UPY5 501 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 POLDIP2Q9Y2S7 368 aa20.33■□□□□ 0.85
UPF3A-209ENST00000492270 RFPL4AA6NLU0 287 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 RFPL4AL1F8VTS6 287 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 GPR37O15354 613 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 NOS1APO75052 506 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-209ENST00000492270 WBP4O75554 376 aaKnown RBP20.32■□□□□ 0.84
UPF3A-209ENST00000492270 PRTN3P24158 256 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 DLX1P56177 255 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 PRB3Q04118 309 aaPredicted RBP20.32■□□□□ 0.84
UPF3A-209ENST00000492270 SMIM21Q3B7S5 101 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 TMEM244Q5VVB8 128 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 OR51A4Q8NGJ6 313 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 ERVK13-1Q9NX77 482 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 KPTNQ9Y664 436 aa20.32■□□□□ 0.84
UPF3A-209ENST00000492270 DSCAML1Q8TD84 2053 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 GATBO75879 557 aaKnown RBP20.31■□□□□ 0.84
UPF3A-209ENST00000492270 NXPH2O95156 264 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 FADS2O95864 444 aaKnown RBP20.31■□□□□ 0.84
UPF3A-209ENST00000492270 CAV3P56539 151 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 RAB40BQ12829 278 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 PDCD1Q15116 288 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 SDSLQ96GA7 329 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 PKIBQ9C010 78 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 HES4Q9HCC6 221 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 SIRT7Q9NRC8 400 aa20.31■□□□□ 0.84
UPF3A-209ENST00000492270 RPL36Q9Y3U8 105 aaKnown RBP20.31■□□□□ 0.84
UPF3A-209ENST00000492270 TMEM89A2RUT3 159 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 OR4C45A6NMZ5 311 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 INMTO95050 263 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 ISG15P05161 165 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 CCR9P51686 369 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 FUT6P51993 359 aa20.3■□□□□ 0.84
UPF3A-209ENST00000492270 ERVK11-1P61568 191 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms