RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MOB1AQ9H8S9 216 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 TNFRSF19Q9NS68 423 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 CLN6Q9NWW5 311 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 FBLN5Q9UBX5 448 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 MRM2Q9UI43 246 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 ENPP5Q9UJA9 477 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 PIGLQ9Y2B2 252 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 SF3B6Q9Y3B4 125 aaKnown RBP6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 FAM96BQ9Y3D0 163 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 R4GMQ9 66 aa6.83□□□□□ -1.32
SMARCB1-207ENST00000491967 FAM90A8PA6NJQ4 464 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC22A31A6NKX4 558 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 RFPL4AA6NLU0 287 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 VGLL3A8MV65 326 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 E9PQ18 207 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 RFPL4AL1F8VTS6 287 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 J3QT63 122 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 M0QZ24 198 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 TIMM23O14925 209 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 SYNGR1O43759 233 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 MITFO75030 526 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 PRDX2P32119 198 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 DLX6P56179 175 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 CXCR4P61073 352 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 ACTR3P61158 418 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 ISL1P61371 349 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 RPS7P62081 194 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 PRB3Q04118 309 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 KLRD1Q13241 179 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 CLVS2Q5SYC1 327 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 TMEM200BQ69YZ2 307 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 HAGHLQ6PII5 290 aaPredicted RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 KCTD8Q6ZWB6 473 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 MOB3CQ70IA8 216 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 BCDIN3DQ7Z5W3 292 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF573Q86YE8 665 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 PNKDQ8N490 385 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 FAM81AQ8TBF8 368 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 BCAS4Q8TDM0 211 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 C17orf50Q8WW18 174 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 H1FXQ92522 213 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 APOL4Q9BPW4 351 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 RBM4BQ9BQ04 359 aaKnown RBP6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 PKIBQ9C010 78 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 FAM234AQ9H0X4 552 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 MMP27Q9H306 513 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 C19orf12Q9NSK7 152 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 OR52A1Q9UKL2 312 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 SNX5Q9Y5X3 404 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 PLXNB1O43157 2135 aa6.82□□□□□ -1.32
SMARCB1-207ENST00000491967 MEIOCA2RUB1 952 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 C17orf98A8MV24 154 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 LOC110117498-PIK3R3F6TDL0 507 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 G3V2T6 193 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 K7N7A8 449 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 MAGEB4O15481 346 aaPredicted RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF737O75373 536 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SULT1C4O75897 302 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 MRPL3P09001 348 aaKnown RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 NDUFB7P17568 137 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 KIR2DS4P43632 304 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 GMFBP60983 142 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 RPL31P62899 125 aaKnown RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 DEFA6Q01524 100 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 IL24Q13007 206 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 BLMHQ13867 455 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SMIM21Q3B7S5 101 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 KIAA2026Q5HYC2 2103 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 DMRTC1Q5HYR2 192 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC25A30Q5SVS4 291 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 PLCXD3Q63HM9 321 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC35E4Q6ICL7 350 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 BRICD5Q6PL45 260 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SSX6Q7RTT6 188 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 CATSPERDQ86XM0 798 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC35F2Q8IXU6 374 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 TCEANCQ8N8B7 351 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 PPP1R35Q8TAP8 253 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 CFHR4Q92496 578 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 PRRG3Q9BZD7 231 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 ELL3Q9HB65 397 aaPredicted RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 WARS2Q9UGM6 360 aaKnown RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC22A13Q9Y226 551 aa6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
SMARCB1-207ENST00000491967 PRKDCP78527 4128 aaKnown RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PQ09 198 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PQL4 384 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 J3QRE1 110 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 M0R129 80 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 RBP4P02753 201 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 TK1P04183 234 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 OR2T7P0C7T2 308 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 FASP25445 335 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 HTR1FP30939 366 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 POLR2IP36954 125 aaKnown RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 HAAOP46952 286 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 GABRA2P47869 451 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 EFNB2P52799 333 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 TMED1Q13445 227 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 UBE2V2Q15819 145 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms