RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 CENPVL3A0A0U1RRI6 287 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 LOC107986453A0A1B0GWG9 222 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 PQLC2LA1A4F0 135 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 E9PQ18 207 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 H3BSH0 61 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 CLDN34H7C241 214 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 SYNGR1O43759 233 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 GATBO75879 557 aaKnown RBP12.45□□□□□ -0.42
USP39-217ENST00000491659 TFF1P04155 84 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
USP39-217ENST00000491659 PGA5P0DJD9 388 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 PSG2P11465 335 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 CAV3P56539 151 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 ISL1P61371 349 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 DGUOKQ16854 277 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 ACP7Q6ZNF0 438 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 VMO1Q7Z5L0 202 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 KCTD20Q7Z5Y7 419 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 PRSS35Q8N3Z0 413 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 TRMT10AQ8TBZ6 339 aaKnown RBP12.45□□□□□ -0.42
USP39-217ENST00000491659 C1orf147Q96MC9 270 aaPredicted RBP12.45□□□□□ -0.42
USP39-217ENST00000491659 Q96MT0 163 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 MYCBPQ99417 103 aaPredicted RBP12.45□□□□□ -0.42
USP39-217ENST00000491659 ZNF222Q9UK12 451 aa12.45□□□□□ -0.42
USP39-217ENST00000491659 IGKV1D-17A0A075B6S4 117 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 IGHV1-69DA0A0B4J2H0 117 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 A0A1W2PQ09 198 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 SLC16A6O15403 523 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 NXPH2O95156 264 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 BAG2O95816 211 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 SERPINA3P01011 423 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 IGHV1-69P01742 117 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 KIR3DL2P43630 455 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 CAPZA1P52907 286 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ACTA2P62736 377 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ACTG2P63267 376 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ZNF91Q05481 1191 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 CNN3Q15417 329 aaKnown RBP12.44□□□□□ -0.42
USP39-217ENST00000491659 SLC9A3R2Q15599 337 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ENTHD1Q8IYW4 607 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ACBD7Q8N6N7 88 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 NPRL2Q8WTW4 380 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ZNF488Q96MN9 340 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 PKIBQ9C010 78 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 CHST5Q9GZS9 411 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 NOX4Q9NPH5 578 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 ANK2Q01484 3957 aa12.44□□□□□ -0.42
USP39-217ENST00000491659 LOC100130705A0A1B0GUX0 176 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 FAM230AA0A1W2PPH8 454 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 J3QRE1 110 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 SLC1A7O00341 560 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 HOXA3O43365 443 aaPredicted RBP12.43□□□□□ -0.42
USP39-217ENST00000491659 NOS1APO75052 506 aaPredicted RBP12.43□□□□□ -0.42
USP39-217ENST00000491659 HTR1AP08908 422 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 HKR1P10072 659 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
USP39-217ENST00000491659 MPZP25189 248 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 CFPP27918 469 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 FOXL1Q12952 345 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 AWAT1Q58HT5 328 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 TMEM244Q5VVB8 128 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 OR2G2Q8NGZ5 317 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 LGALS12Q96DT0 336 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 SDSLQ96GA7 329 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 SLC29A1Q99808 456 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 AASSQ9UDR5 926 aa12.43□□□□□ -0.42
USP39-217ENST00000491659 EXOGQ9Y2C4 368 aaKnown RBP12.43□□□□□ -0.42
USP39-217ENST00000491659 TRBV23-1A0A0A0MS06 115 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 RFPL4AA6NLU0 287 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 RFPL4AL1F8VTS6 287 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 J3QLW9 94 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ZNF19P17023 458 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ZNF20P17024 532 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 GABRB1P18505 474 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 FUT6P51993 359 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 OR12D2P58182 307 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 GUCA2AQ02747 115 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 IL24Q13007 206 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 BLMHQ13867 455 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 CALHM1Q8IU99 346 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 PDZD9Q8IXQ8 264 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ZNF555Q8NEP9 628 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 PP6455Q8WZ26 134 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 BORCS8Q96FH0 119 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 C4orf36Q96KX1 117 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 NRIP2Q9BQI9 281 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ALG8Q9BVK2 526 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 ELL3Q9HB65 397 aaPredicted RBP12.42□□□□□ -0.42
USP39-217ENST00000491659 SIRT7Q9NRC8 400 aa12.42□□□□□ -0.42
USP39-217ENST00000491659 SMPD3Q9NY59 655 aaPredicted RBP12.42□□□□□ -0.42
USP39-217ENST00000491659 MAB21L2Q9Y586 359 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms