RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 LOC105371242A0A075B767 164 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 J3QT63 122 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 TBX1O43435 398 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 GTF2A1P52655 376 aaPredicted RBP7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 LCN2P80188 198 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 GAPTQ8N292 157 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 TIMD4Q96H15 378 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 HIVEP2P31629 2446 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 PIN1P1O15428 100 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 LDLRAD3Q86YD5 345 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 C1orf87Q8N0U7 546 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 SMIM19Q96E16 107 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 IL36GQ9NZH8 169 aa7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 RPUSD1Q9UJJ7 312 aaKnown RBP7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 SOX21Q9Y651 276 aaPredicted RBP7.55□□□□□ -1.2
SUPT20H-220ENST00000490716 C2CD3Q4AC94 2353 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 FAM90A8PA6NJQ4 464 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 DVL1O14640 695 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TFF1P04155 84 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 DCKP27707 260 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 LRRC29Q8WV35 223 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 Q96MT0 163 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 FBN3Q75N90 2809 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 A0A0G2JMP0 313 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 A0A0X1KG70 313 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 C17orf98A8MV24 154 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ZNF879B4DU55 563 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ZNF732B4DXR9 585 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 PHF1O43189 567 aaPredicted RBP7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 GYPAP02724 150 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 KLHL22Q53GT1 634 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 CEP78Q5JTW2 689 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TTC23Q5W5X9 447 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 OR4M2Q8NGB6 313 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 OR51T1Q8NGJ9 327 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 PAPOLGQ9BWT3 736 aaKnown RBP7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 NCOR1P1Q9H4R4 102 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TMEM212A6NML5 194 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ZNF205O95201 554 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 KNG1P01042 644 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 KRT8P05787 483 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 CDK1P06493 297 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 SELLP14151 372 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ATF1P18846 271 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 PITPNBP48739 271 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 RPS7P62081 194 aaKnown RBP7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TAF13Q15543 124 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 LDLRAD2Q5SZI1 272 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 TBX5Q99593 518 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 GFI1Q99684 422 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 FAM234AQ9H0X4 552 aa7.54□□□□□ -1.2
SUPT20H-220ENST00000490716 ANKRD61A6NGH8 418 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 LRRC30A6NM36 301 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 ECDO95905 644 aaPredicted RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 PCMT1P22061 227 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 FUT6P51993 359 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 BPIFB3P59826 476 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 RPL22L1Q6P5R6 122 aaKnown RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 PIP4P2Q8N4L2 257 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 YIPF7Q8N8F6 280 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 OR10H4Q8NGA5 316 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 NLKQ9UBE8 527 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 RBP4P02753 201 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 OR2G6Q5TZ20 316 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 LHFPL3Q86UP9 236 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 ZNF561Q8N587 486 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 FAM216BQ8N7L0 139 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 CORO2AQ92828 525 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 NARFLQ9H6Q4 476 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 UBAP1Q9NZ09 502 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 KPTNQ9Y664 436 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 IGHV3-64DA0A0J9YX35 117 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 OR2AT4A6NND4 320 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 K7N7A8 449 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 DENRO43583 198 aaKnown RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 CSN2P05814 226 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 CRHBPP24387 322 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 QRFPP83859 136 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 C6orf141Q5SZD1 244 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 TMEM244Q5VVB8 128 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 CDH26Q8IXH8 852 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 PIFOQ8TCI5 191 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 FAM216AQ8WUB2 273 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 RNF170Q96K19 258 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 GAL3ST1Q99999 423 aa7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 PPIL3Q9H2H8 161 aaKnown RBP7.53□□□□□ -1.2
SUPT20H-220ENST00000490716 ISYNA1Q9NPH2 558 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms