RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	MDC1	Q14676	2089 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TRAV30	A0A087WSZ9	112 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	IGHV2-70D	A0A0C4DH43	119 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM230A	A0A1W2PPH8	454 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ARL5C	A6NH57	179 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC38A8	A6NNN8	435 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853		F6UZH7	168 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ARPC3	O15145	178 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	YPEL1	O60688	119 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	WDR1	O75083	606 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C1QL1	O75973	258 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF205	O95201	554 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SYNGR4	O95473	234 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR5G3	P0C626	314 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CT45A8	P0DMV1	189 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CT45A9	P0DMV2	189 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CSNK2A2	P19784	350 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PTN	P21246	168 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	AK4	P27144	223 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CSNK1A1	P48729	337 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SPINT3	P49223	89 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF41	P51814	821 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CEBPG	P53567	150 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM3B	P58499	235 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SUPT4H1	P63272	117 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CXCL9	Q07325	125 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TAF10	Q12962	218 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	IL24	Q13007	206 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TSTA3	Q13630	321 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ENDOG	Q14249	297 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	IAH1	Q2TAA2	248 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MORN2	Q502X0	79 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CT45A2	Q5DJT8	189 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CT83	Q5H943	113 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	VAX1	Q5SQQ9	334 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C1orf100	Q5SVJ3	147 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GLYATL3	Q5SZD4	288 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR4C11	Q6IEV9	310 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CFAP161	Q6P656	301 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF550	Q7Z398	422 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MYPOP	Q86VE0	399 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C12orf76	Q8N812	135 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NUP43	Q8NFH3	380 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR6K6	Q8NGW6	343 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ADAMTS15	Q8TE58	950 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNRF4	Q8WWF5	429 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GLYATL1	Q969I3	302 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM46B	Q96A09	425 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SMIM12	Q96EX1	92 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CIB3	Q96Q77	187 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	YPEL2	Q96QA6	119 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PAAF1	Q9BRP4	392 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ALG12	Q9BV10	488 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PCBD2	Q9H0N5	130 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	KCNK15	Q9H427	330 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZMAT3	Q9HA38	289 aa	Known RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SDF2L1	Q9HCN8	221 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC2A9	Q9NRM0	540 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LANCL2	Q9NS86	450 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	WSB2	Q9NYS7	404 aa	Predicted RBP	4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CKLF	Q9UBR5	152 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FBLN5	Q9UBX5	448 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RNF150	Q9ULK6	438 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC7A11	Q9UPY5	501 aa		4.2	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NLRC5	Q86WI3	1866 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853		A0A1W2PQ45	241 aa	Predicted RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853		A0A1W2PQY0	241 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PQBP1	O60828	265 aa	Known RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MMP23A	O75900	390 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	KLF8	O95600	359 aa	Predicted RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	HBE1	P02100	147 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DBI	P07108	87 aa	Known RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF43	P17038	809 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	BMP5	P22003	454 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SERPINA4	P29622	427 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RPL23A	P62750	156 aa	Known RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PAFAH1B2	P68402	229 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	P2RY6	Q15077	328 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM95	Q3KNT9	176 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ARHGAP11B	Q3KRB8	267 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PRAMEF14	Q5SWL7	426 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LCE1D	Q5T752	114 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LINC01590	Q5TEZ4	76 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM225	Q6GV28	225 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF880	Q6PDB4	577 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PLXDC2	Q6UX71	529 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DPPA3	Q6W0C5	159 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RFLNA	Q6ZTI6	216 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CDC20B	Q86Y33	519 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM156	Q8N614	296 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CSNK1A1L	Q8N752	337 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GVQW1	Q8N7I0	195 aa		4.19	□□□□□ -1.74
SNRNP40-206	ENST00000489853	STPG4	Q8N801	248 aa		4.19	□□□□□ -1.74

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