RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	OGFRL1	Q5TC84	451 aa	Predicted RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	METTL11B	Q5VVY1	283 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	RBMS3	Q6XE24	437 aa	Known RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	PHC2	Q8IXK0	858 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	DHRSX	Q8N5I4	330 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	POC1A	Q8NBT0	407 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	ANGPTL6	Q8NI99	470 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	HAVCR2	Q8TDQ0	301 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	C22orf15	Q8WYQ4	148 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	PELI1	Q96FA3	418 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	MED30	Q96HR3	178 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	CHST5	Q9GZS9	411 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	DCLRE1B	Q9H816	532 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	ISG20L2	Q9H9L3	353 aa	Known RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772		A0A1B0GW55	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	CASQ2	O14958	399 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	SYNGR1	O43759	233 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	NOS1AP	O75052	506 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	TOX4	O94842	621 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	VENTX	O95231	258 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ACAA1	P09110	424 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L2	P0CJ85	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L3	P0CJ86	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L4	P0CJ87	422 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L5	P0CJ88	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L6	P0CJ89	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L7	P0CJ90	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	PGA5	P0DJD9	388 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF20	P17024	532 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DCK	P27707	260 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	GABRA2	P47869	451 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	TGM4	P49221	684 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	FUT6	P51993	359 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ADARB1	P78563	741 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ALKBH1	Q13686	389 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	CNN3	Q15417	329 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	SMN1	Q16637	294 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4L9	Q6RFH8	374 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF788	Q6ZQV5	615 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF676	Q8N7Q3	588 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	CNIH3	Q8TBE1	160 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	TRMT10A	Q8TBZ6	339 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	NPRL2	Q8WTW4	380 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ZFAND2B	Q8WV99	257 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	GAFA1	Q96PS6	74 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	NRIP2	Q9BQI9	281 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	PCGF1	Q9BSM1	259 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	C19orf24	Q9BVV8	132 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	PKIB	Q9C010	78 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	MS4A7	Q9GZW8	240 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	CNTD2	Q9H8S5	307 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	FGF20	Q9NP95	211 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	DUX4	Q9UBX2	424 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	SLC25A10	Q9UBX3	287 aa	Predicted RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF69	Q9UC07	566 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	RPUSD1	Q9UJJ7	312 aa	Known RBP	9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	HHLA2	Q9UM44	414 aa		9.18	□□□□□ -0.94
GGA1-222	ENST00000489772	IGHV3OR16-10	A0A075B7F0	116 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	TMEM212	A6NML5	194 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	OR4C45	A6NMZ5	311 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772		H0YAE9	185 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	SIGLEC5	O15389	551 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	FCN3	O75636	299 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	NXPH2	O95156	264 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	CCDC159	P0C7I6	412 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	OCM2	P0CE71	109 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	OCM	P0CE72	109 aa	Predicted RBP	9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	IGHV4-38-2	P0DP08	117 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	PSG2	P11465	335 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	MYL12A	P19105	171 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	AMY2B	P19961	511 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	MPZ	P25189	248 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	CAPG	P40121	348 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	GBX2	P52951	348 aa	Predicted RBP	9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	IL24	Q13007	206 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	DGUOK	Q16854	277 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	GPR157	Q5UAW9	335 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	TMPRSS11A	Q6ZMR5	421 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	ACP7	Q6ZNF0	438 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	ANGPTL5	Q86XS5	388 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	FGFRL1	Q8N441	504 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	OR13C3	Q8NGS6	347 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	H1FX	Q92522	213 aa	Known RBP	9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	FGGY	Q96C11	551 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	BORCS8	Q96FH0	119 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	DMRTB1	Q96MA1	342 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF488	Q96MN9	340 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	WDFY2	Q96P53	400 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF649	Q9BS31	505 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	JAM3	Q9BX67	310 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	COMMD4	Q9H0A8	199 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	HSPE1-MOB4	S4R3N1	261 aa		9.17	□□□□□ -0.94
GGA1-222	ENST00000489772	IGKV1D-17	A0A075B6S4	117 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	TRAV40	A0A0B4J280	105 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	RFPL4A	A6NLU0	287 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	RFPL4AL1	F8VTS6	287 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	TRIM77	I1YAP6	450 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	SLC1A7	O00341	560 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	TFF1	P04155	84 aa		9.16	□□□□□ -0.94
GGA1-222	ENST00000489772	SFTPB	P07988	381 aa		9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms