RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 HTR3BO95264 441 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 CSTBP04080 98 aaKnown RBP18.46■□□□□ 0.55
SMC4-221ENST00000489573 SELENOVP59797 346 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 RPS27AP62979 156 aaKnown RBP18.46■□□□□ 0.55
SMC4-221ENST00000489573 ADAM5Q6NVV9 412 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 Q6ZR03 302 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 OR13G1Q8NGZ3 307 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 OR51F2Q8NH61 342 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 MRPL24Q96A35 216 aaKnown RBP18.46■□□□□ 0.55
SMC4-221ENST00000489573 SYT3Q9BQG1 590 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 ZNF442Q9H7R0 627 aa18.46■□□□□ 0.55
SMC4-221ENST00000489573 A0A1W2PQ09 198 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 LRP5LA4QPB2 252 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 H0YL77 283 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 MLNRO43193 412 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 C1QL1O75973 258 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 CHRM2P08172 466 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 MOGAT2Q3SYC2 334 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 HAGHLQ6PII5 290 aaPredicted RBP18.45■□□□□ 0.54
SMC4-221ENST00000489573 NUDT16L1Q9BRJ7 211 aaKnown RBP18.45■□□□□ 0.54
SMC4-221ENST00000489573 NICN1Q9BSH3 213 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 PKIBQ9C010 78 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 OR51I2Q9H344 312 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 PCDHB16Q9NRJ7 776 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 NKIRAS2Q9NYR9 191 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 POU2F3Q9UKI9 436 aa18.45■□□□□ 0.54
SMC4-221ENST00000489573 CFAP46Q8IYW2 2715 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.44■□□□□ 0.54
SMC4-221ENST00000489573 A0A1B0GWJ7 208 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 TMEM210A6NLX4 147 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 RAB27BO00194 218 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 GSTZ1O43708 216 aaPredicted RBP18.44■□□□□ 0.54
SMC4-221ENST00000489573 CYB5AP00167 134 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 GTF2F2P13984 249 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 VEGFCP49767 419 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 MRPS10P82664 201 aaKnown RBP18.44■□□□□ 0.54
SMC4-221ENST00000489573 DGCR2P98153 550 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 BEX5Q5H9J7 111 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 TMEM200AQ86VY9 491 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 MKXQ8IYA7 352 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 SPERTQ8NA61 448 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 OR10AD1Q8NGE0 317 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 SMIM4Q8WVI0 70 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 TM2D1Q9BX74 207 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 MRPL37Q9BZE1 423 aaKnown RBP18.44■□□□□ 0.54
SMC4-221ENST00000489573 SELENOIQ9C0D9 397 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 CXXC4Q9H2H0 198 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 MSL2Q9HCI7 577 aa18.44■□□□□ 0.54
SMC4-221ENST00000489573 NPDC1Q9NQX5 325 aaPredicted RBP18.44■□□□□ 0.54
SMC4-221ENST00000489573 A0A0A6YYD4 124 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 J3QT63 122 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 CD3EP07766 207 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 SCN1BQ07699 218 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 RGS21Q2M5E4 152 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 RNASE12Q5GAN4 147 aaKnown RBP18.43■□□□□ 0.54
SMC4-221ENST00000489573 FAM76BQ5HYJ3 339 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 WDR86Q86TI4 376 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 OR51T1Q8NGJ9 327 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 OR10R2Q8NGX6 335 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 SLAMF9Q96A28 289 aa18.43■□□□□ 0.54
SMC4-221ENST00000489573 THAP7Q9BT49 309 aaPredicted RBP18.43■□□□□ 0.54
SMC4-221ENST00000489573 GCN1Q92616 2671 aaKnown RBP18.43■□□□□ 0.54
SMC4-221ENST00000489573 SHISA9B4DS77 424 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 GABARAPH6UMI1 98 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 CPT2P23786 658 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 MPZP25189 248 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 DEFA1P59665 94 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 DEFA3P59666 94 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 MZT1Q08AG7 82 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 IL24Q13007 206 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 DMRTC2Q8IXT2 367 aaPredicted RBP18.42■□□□□ 0.54
SMC4-221ENST00000489573 FAM89BQ8N5H3 189 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 C19orf18Q8NEA5 215 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 OR56B1Q8NGI3 324 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 GCDHQ92947 438 aaPredicted RBP18.42■□□□□ 0.54
SMC4-221ENST00000489573 YIPF5Q969M3 257 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 TRIM63Q969Q1 353 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 Q96M66 194 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 AUNIPQ9H7T9 357 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 TAAR3PQ9P1P4 343 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 PLSCR5A0PG75 271 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 SYNGR1O43759 233 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 SFTPBP07988 381 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 PTHLHP12272 177 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 INPP1P49441 399 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 OSR2Q8N2R0 312 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 CHST4Q8NCG5 386 aa18.42■□□□□ 0.54
SMC4-221ENST00000489573 MRPS24Q96EL2 167 aaKnown RBP18.42■□□□□ 0.54
SMC4-221ENST00000489573 DIDO1Q9BTC0 2240 aaKnown RBP18.41■□□□□ 0.54
SMC4-221ENST00000489573 ZSCAN5BA6NJL1 495 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 VSTM5A8MXK1 200 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 F5H5P2 479 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 TRAPPC2LH3BP13 241 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 CD3GP09693 182 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 BCL3P20749 454 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 ZNF154Q13106 437 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 ADIPOQQ15848 244 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 Q8NFD4 153 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 SETD6Q8TBK2 473 aa18.41■□□□□ 0.54
SMC4-221ENST00000489573 FCAMRQ8WWV6 532 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms