RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 PIGLQ9Y2B2 252 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 A0A1W2PPH5 198 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 CCDC182A6NF36 153 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 ATP8B1O43520 1251 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 HMGN1P05114 100 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 PGA5P0DJD9 388 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 COX7A1P24310 79 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 HAAOP46952 286 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 MFGE8Q08431 387 aaPredicted RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 RIPPLY1Q0D2K3 151 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 APOFQ13790 326 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 FAM189A2Q15884 450 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 SMIM21Q3B7S5 101 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 ZBTB37Q5TC79 503 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 TMEM236Q5W0B7 351 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 KCTD18Q6PI47 426 aaPredicted RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 LHFPL4Q7Z7J7 247 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 LYG1Q8N1E2 194 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 BATF2Q8N1L9 274 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 ITFG2Q969R8 447 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 PPP1R14AQ96A00 147 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 CCDC124Q96CT7 223 aaKnown RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 NSL1Q96IY1 281 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 LRGUKQ96M69 825 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 OR8B4Q96RC9 309 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
CPSF3-204ENST00000489403 MROQ9BYG7 248 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 YIPF3Q9GZM5 350 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 SLC25A19Q9HC21 320 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 USE1Q9NZ43 259 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 ENPP5Q9UJA9 477 aa10.04□□□□□ -0.8
CPSF3-204ENST00000489403 FAM90A8PA6NJQ4 464 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 J3QT63 122 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 SLC1A7O00341 560 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 GNGT2O14610 69 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 DHRS3O75911 302 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 NRASP01111 189 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 TTRP02766 147 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 PRDX2P32119 198 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 LGALS4P56470 323 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 ROM1Q03395 351 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 PLA1AQ53H76 456 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF684Q5T5D7 378 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 CCBE1Q6UXH8 406 aaPredicted RBP10.03□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF782Q6ZMW2 699 aaPredicted RBP10.03□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF679Q8IYX0 411 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 OR2T27Q8NH04 317 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 CANT1Q8WVQ1 401 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF556Q9HAH1 456 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 SERTAD4Q9NUC0 356 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 NUFIP1Q9UHK0 495 aaKnown RBP10.03□□□□□ -0.8
CPSF3-204ENST00000489403 TCF19Q9Y242 345 aa10.03□□□□□ -0.8
CPSF3-204ENST00000489403 hCG_1809904A0A1W2PP81 198 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 A0A1W2PPE2 198 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 A0A1W2PR64 198 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 A0A1W2PRV1 198 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 PQLC2LA1A4F0 135 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 VGLL3A8MV65 326 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 PIN1P1O15428 100 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 GSC2O15499 205 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 NOS1APO75052 506 aaPredicted RBP10.02□□□□□ -0.81
CPSF3-204ENST00000489403 FBXO24O75426 580 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF254O75437 659 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 SRSF10O75494 262 aaKnown RBP10.02□□□□□ -0.81
CPSF3-204ENST00000489403 TK1P04183 234 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 CD28P10747 220 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 PRKACGP22612 351 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 CALB2P22676 271 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 RIDAP52758 137 aaKnown RBP10.02□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF829Q3KNS6 432 aaPredicted RBP10.02□□□□□ -0.81
CPSF3-204ENST00000489403 NSUN5P1Q3KNT7 163 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 TMEM42Q69YG0 159 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 ZNF573Q86YE8 665 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 Q8N2B8 174 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 DTX3Q8N9I9 347 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 NRIP2Q9BQI9 281 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 C1orf21Q9H246 121 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 HES4Q9HCC6 221 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 GPR173Q9NS66 373 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 OR14J1Q9UGF5 321 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 POLDIP2Q9Y2S7 368 aa10.02□□□□□ -0.81
CPSF3-204ENST00000489403 C17orf98A8MV24 154 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 ODF3BA8MYP8 253 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 DLGAP1O14490 977 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 E2F6O75461 281 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 NXPH2O95156 264 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 T-ENOLP0DO92 83 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 PIPP12273 146 aaPredicted RBP10.01□□□□□ -0.81
CPSF3-204ENST00000489403 ANXA8P13928 327 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 MPZP25189 248 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 RAB13P51153 203 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 DLX6P56179 175 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 SNAPC1Q16533 368 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 OXLD1Q5BKU9 147 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
CPSF3-204ENST00000489403 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms