RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 C1QL2Q7Z5L3 287 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 CALHM1Q8IU99 346 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 ZNF843Q8N446 348 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 CHST4Q8NCG5 386 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 OR51T1Q8NGJ9 327 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 SMIM4Q8WVI0 70 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 SLAMF9Q96A28 289 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 MRPL24Q96A35 216 aaKnown RBP8.55□□□□□ -1.04
USP11-211ENST00000489111 ABHD1Q96SE0 405 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 PKIBQ9C010 78 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 MSL2Q9HCI7 577 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 IL36GQ9NZH8 169 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 POLDIP2Q9Y2S7 368 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 SHANK1Q9Y566 2161 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 POLEQ07864 2286 aa8.55□□□□□ -1.04
USP11-211ENST00000489111 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 IGLV3-9A0A075B6K5 115 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 A0A1W2PP11 408 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 GABARAPH6UMI1 98 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 OR4A8P0C604 315 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 DGCR2P98153 550 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 IFITM3Q01628 133 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 IL24Q13007 206 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 BAK1Q16611 211 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 MSMPQ1L6U9 139 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 TMEM255AQ5JRV8 349 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 HACD4Q5VWC8 232 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 ZNF57Q68EA5 555 aaPredicted RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 ASCL4Q6XD76 172 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 BIVMQ86UB2 503 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 TMEM200AQ86VY9 491 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 LRP11Q86VZ4 500 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 OSR2Q8N2R0 312 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 POC5Q8NA72 575 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 OR2Z1Q8NG97 314 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 OR10R2Q8NGX6 335 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 SETD6Q8TBK2 473 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 FCAMRQ8WWV6 532 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 RAB3CQ96E17 227 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 MRPS24Q96EL2 167 aaKnown RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 NUDT16L1Q9BRJ7 211 aaKnown RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 THAP7Q9BT49 309 aaPredicted RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 MRPL37Q9BZE1 423 aaKnown RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 LPAR5Q9H1C0 372 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 OR51I2Q9H344 312 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 PLK3Q9H4B4 646 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 TAAR3PQ9P1P4 343 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 KALRNO60229 2985 aa8.54□□□□□ -1.04
USP11-211ENST00000489111 INTS1Q8N201 2190 aaKnown RBP8.54□□□□□ -1.04
USP11-211ENST00000489111 IGKV1-12A0A0C4DH73 117 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 LINC00854A0A1B0GVQ3 168 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 ZSCAN5BA6NJL1 495 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 A6NLC8 198 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 F5H5P2 479 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 H0YL77 283 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 MLNRO43193 412 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 IGKV1D-12P01611 117 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 HLA-DQB1P01920 261 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 GRPP07492 148 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 CD3GP09693 182 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 TNFSF4P23510 183 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 GABRR1P24046 479 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 MPZP25189 248 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 PRSS3P35030 304 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 KIR2DL3P43628 341 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 ZNF81P51508 661 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 AP3S2P59780 193 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 ARL6IP1Q15041 203 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 ADIPOQQ15848 244 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 TRIM16LQ309B1 348 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 MOGAT2Q3SYC2 334 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 Q6ZR03 302 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 Q8IYB0 196 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 FBXL14Q8N1E6 418 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 AQP3Q92482 292 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 GCDHQ92947 438 aaPredicted RBP8.53□□□□□ -1.04
USP11-211ENST00000489111 PIK3IP1Q96FE7 263 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 ELMOD3Q96FG2 381 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 Q96M66 194 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 NICN1Q9BSH3 213 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 TM2D1Q9BX74 207 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 AUNIPQ9H7T9 357 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
USP11-211ENST00000489111 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
USP11-211ENST00000489111 EPG5Q9HCE0 2579 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 A0A0A6YYD4 124 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 IGHV3-64DA0A0J9YX35 117 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 hCG_1807616A0A1W2PRN6 198 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 TMEM235A6NFC5 223 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 SHISA9B4DS77 424 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 RAB27BO00194 218 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 SYNGR1O43759 233 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 C1QL1O75973 258 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 LPLP06858 475 aa8.52□□□□□ -1.05
USP11-211ENST00000489111 SFTPBP07988 381 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms