RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PBOV1Q9GZY1 135 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 ATP23Q9Y6H3 246 aa16.61■□□□□ 0.25
CCM2-216ENST00000488727 ABCA12Q86UK0 2595 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 A0A1B0GVI7 797 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 F5H5K5 113 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 ICMTO60725 284 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 SMPD2O60906 423 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 NGFP01138 241 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 ALDOBP05062 364 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 ANOS1P23352 680 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 Q5BKY6 102 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 NAA40Q86UY6 237 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 OR51A2Q8NGJ7 313 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 PHF21AQ96BD5 680 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 CA10Q9NS85 328 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 CISD1Q9NZ45 108 aaKnown RBP16.6■□□□□ 0.25
CCM2-216ENST00000488727 APCP25054 2843 aa16.6■□□□□ 0.25
CCM2-216ENST00000488727 FLNBO75369 2602 aaKnown RBP16.6■□□□□ 0.25
CCM2-216ENST00000488727 CACNA1DQ01668 2161 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 AKAP6Q13023 2319 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 MEIKINA0A087WXM9 373 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 NDUFB6O95139 128 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 RAB6AP20340 208 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 HSD11B1P28845 292 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 UCP2P55851 309 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 GLYATL3Q5SZD4 288 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 METTL11BQ5VVY1 283 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 RFPL4BQ6ZWI9 263 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 MED30Q96HR3 178 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 KCNK15Q9H427 330 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 RANBP3Q9H6Z4 567 aaPredicted RBP16.59■□□□□ 0.25
CCM2-216ENST00000488727 NPTNQ9Y639 398 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 TRAV18A0A075B6X5 111 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 HS3ST1O14792 307 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 KDM4BO94953 1096 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 IL5P05113 134 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 PRSS3P35030 304 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 PRKXP51817 358 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 ERVS71-1P61550 626 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 TAF13Q15543 124 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 MSMPQ1L6U9 139 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 ZNF529Q6P280 563 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 VHLLQ6RSH7 139 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 GPX8Q8TED1 209 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 SORCS2Q96PQ0 1159 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 ATG5Q9H1Y0 275 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 UBTD1Q9HAC8 227 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 SCPEP1Q9HB40 452 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 CGGBP1Q9UFW8 167 aaPredicted RBP16.59■□□□□ 0.25
CCM2-216ENST00000488727 ING4Q9UNL4 249 aa16.59■□□□□ 0.25
CCM2-216ENST00000488727 M0R135 149 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 FABP7O15540 132 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 LMX1BO60663 402 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 BDKRB2P30411 391 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 THBS4P35443 961 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 PCGF3Q3KNV8 242 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 LAMTOR1Q6IAA8 161 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 TMEM171Q8WVE6 324 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 NRGNQ92686 78 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 FBXW5Q969U6 566 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 SPTSSAQ969W0 71 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 ZNF799Q96GE5 643 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 EIF3KQ9UBQ5 218 aaKnown RBP16.58■□□□□ 0.24
CCM2-216ENST00000488727 ZNF222Q9UK12 451 aa16.58■□□□□ 0.24
CCM2-216ENST00000488727 A0A1B0GTI1 187 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 SMLR1H3BR10 107 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 ARPC1BO15143 372 aaKnown RBP16.57■□□□□ 0.24
CCM2-216ENST00000488727 SYT7O43581 403 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 VEGFCP49767 419 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 GRB2P62993 217 aaKnown RBP16.57■□□□□ 0.24
CCM2-216ENST00000488727 GLDNQ6ZMI3 551 aaPredicted RBP16.57■□□□□ 0.24
CCM2-216ENST00000488727 COLCA1Q6ZS62 124 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 GRPEL2Q8TAA5 225 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 FGGYQ96C11 551 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 UQCC2Q9BRT2 126 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 LIME1Q9H400 295 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 NKIRAS2Q9NYR9 191 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 FLVCR2Q9UPI3 526 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 SPEF1Q9Y4P9 236 aa16.57■□□□□ 0.24
CCM2-216ENST00000488727 HPXP02790 462 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 CXCL3P19876 107 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 CCL1P22362 96 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 S100A1P23297 94 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 GLRXP35754 106 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 RAD52P43351 418 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ACTBP60709 375 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ACTG1P63261 375 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 C9orf62Q8N4C0 152 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 JAGN1Q8N5M9 183 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 OR1M1Q8NGA1 313 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 OR4C16Q8NGL9 310 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 OR1J1Q8NGS3 322 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 DHRS9Q9BPW9 319 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 C1QTNF5Q9BXJ0 243 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 BCL2L14Q9BZR8 327 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 POFUT1Q9H488 388 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ZNF442Q9H7R0 627 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 TMEM138Q9NPI0 162 aa16.56■□□□□ 0.24
CCM2-216ENST00000488727 ZNF107Q9UII5 783 aaPredicted RBP16.56■□□□□ 0.24
CCM2-216ENST00000488727 CSMD2Q7Z408 3487 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms