RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 FBXO36Q8NEA4 188 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR1P1Q8NH06 330 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 TCP10LQ8TDR4 215 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 TMIGD2Q96BF3 282 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZNF707Q96C28 371 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 YIPF6Q96EC8 236 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 SMARCD1Q96GM5 515 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR2M4Q96R27 311 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 GAL3ST2Q9H3Q3 398 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZNF442Q9H7R0 627 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 FBXO8Q9NRD0 319 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 INIPQ9NRY2 104 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 RBFOX1Q9NWB1 397 aaKnown RBP2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 RHBDD3Q9Y3P4 386 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 SLC22A7Q9Y694 548 aa2.02□□□□□ -2.09
HMGB1P36-201ENST00000487709 SBNO1A3KN83 1393 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 IGKV3D-11A0A0A0MRZ8 115 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SEC14L6B5MCN3 397 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 GATCO43716 136 aaKnown RBP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 PLEKHA8P1O95397 391 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 CDK1P06493 297 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 RHOCP08134 193 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 NELFEP18615 380 aaKnown RBP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 CCNOP22674 350 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SPAM1P38567 509 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 HTR2BP41595 481 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 GRB2P62993 217 aaKnown RBP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 ATP5G2Q06055 141 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 ATP6V1FQ16864 119 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 CCDC122Q5T0U0 273 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SLC25A25Q6KCM7 469 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 NT5DC3Q86UY8 548 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 PDPNQ86YL7 162 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 BBS7Q8IWZ6 715 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 ST13P4Q8IZP2 240 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 C1orf64Q8NEQ6 169 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR13C9Q8NGT0 318 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SUN5Q8TC36 379 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 ORAOV1Q8WV07 137 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZFP3Q96NJ6 502 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 PDCD1LG2Q9BQ51 273 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SEC22CQ9BRL7 303 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 MRPL20Q9BYC9 149 aaKnown RBP2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 TM6SF2Q9BZW4 377 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR51B5Q9H339 312 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 KIR3DX1Q9H7L2 352 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 VCX3AQ9NNX9 186 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 TREM1Q9NP99 234 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 RWDD2AQ9UIY3 292 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 SLC7A11Q9UPY5 501 aa2.01□□□□□ -2.09
HMGB1P36-201ENST00000487709 IGHV6-1A0A0B4J1U7 121 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 IGHV2OR16-5A0A0B4J2B6 119 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 GSTTP1A0A1W2PQM5 241 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 RGS5O15539 181 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 NRASP01111 189 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 HRASP01112 189 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 KRASP01116 189 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR5AL1P0C617 328 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR4Q2P0C623 313 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 CD28P10747 220 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 IVDP26440 423 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 TGFBR1P36897 503 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 RGS6P49758 472 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 HCCSP53701 268 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 RBX1P62877 108 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 TNNC1P63316 161 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 TPM4P67936 248 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 XIAPP98170 497 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 APOBEC3HQ6NTF7 200 aaKnown RBP2□□□□□ -2.09
HMGB1P36-201ENST00000487709 UGT2A3Q6UWM9 527 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 LINC00336Q6ZUF6 198 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 DAZ4Q86SG3 579 aaKnown RBP2□□□□□ -2.09
HMGB1P36-201ENST00000487709 STK40Q8N2I9 435 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 NDNFQ8TB73 568 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 OR8D1Q8WZ84 308 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 HGDQ93099 445 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 TOP1MTQ969P6 601 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 S100PBPQ96BU1 408 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZBED3Q96IU2 234 aaPredicted RBP2□□□□□ -2.09
HMGB1P36-201ENST00000487709 FAM19A4Q96LR4 140 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 PLEKHF2Q9H8W4 249 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 SPACA1Q9HBV2 294 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 DAZ1Q9NQZ3 744 aaKnown RBP2□□□□□ -2.09
HMGB1P36-201ENST00000487709 TMEM100Q9NV29 134 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 DHCR7Q9UBM7 475 aaKnown RBP2□□□□□ -2.09
HMGB1P36-201ENST00000487709 CD300AQ9UGN4 299 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 KLF12Q9Y4X4 402 aa2□□□□□ -2.09
HMGB1P36-201ENST00000487709 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 NEURL4Q96JN8 1562 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 BRWD3Q6RI45 1802 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 TMEM72A0PK05 275 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 RAB19A4D1S5 217 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZNF99A8MXY4 864 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 KDELR3O43731 214 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 IGHV1-46P01743 117 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 TPM3P06753 285 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 IL3RAP26951 378 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 GPR4P46093 362 aa1.99□□□□□ -2.09
HMGB1P36-201ENST00000487709 BAMBIQ13145 260 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms