RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 OR51A2Q8NGJ7 313 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 ORAI1Q96D31 301 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 REG4Q9BYZ8 158 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 PPIL3Q9H2H8 161 aaKnown RBP11.19□□□□□ -0.62
COL4A6-207ENST00000487645 TCF7L1Q9HCS4 588 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 DCAF16Q9NXF7 216 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 WIPI2Q9Y4P8 454 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
COL4A6-207ENST00000487645 SRRM5B3KS81 715 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 RHBDL1O75783 438 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 CYB5AP00167 134 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-207ENST00000487645 CD36P16671 472 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 CPT2P23786 658 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 MDH2P40926 338 aaKnown RBP11.18□□□□□ -0.62
COL4A6-207ENST00000487645 KCNJ8Q15842 424 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 FAM27D1Q5T7N8 215 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 SATL1Q86VE3 508 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 ZSCAN4Q8NAM6 433 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-207ENST00000487645 POC1AQ8NBT0 407 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 OR52N4Q8NGI2 321 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 SLITRK2Q9H156 845 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 METTL17Q9H7H0 456 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-207ENST00000487645 RHOFQ9HBH0 211 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 STUB1Q9UNE7 303 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 SSR3Q9UNL2 185 aa11.18□□□□□ -0.62
COL4A6-207ENST00000487645 TRAV1-2A0A0B4J238 106 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 TRAV38-1A0A0B4J264 116 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 LGALS8O00214 317 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 NDUFA2O43678 99 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 SYNGR1O43759 233 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 PGA5P0DJD9 388 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 CD37P11049 281 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 USF1P22415 310 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-207ENST00000487645 ZNF93P35789 620 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-207ENST00000487645 ERVK11-1P61568 191 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 LOXL1Q08397 574 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-207ENST00000487645 ZMYND11Q15326 602 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 DDI2Q5TDH0 399 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 TEX36Q5VZQ5 186 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 CRIP3Q6Q6R5 217 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 GDPGP1Q6ZNW5 385 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 SLC25A26Q70HW3 274 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 LRRTM1Q86UE6 522 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 Q8IYB0 196 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 MUC20Q8N307 709 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-207ENST00000487645 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 FOXRED1Q96CU9 486 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-207ENST00000487645 YIPF6Q96EC8 236 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 SPACA5Q96QH8 159 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 GPER1Q99527 375 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 NRIP2Q9BQI9 281 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 SNTG1Q9NSN8 517 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 GSTK1Q9Y2Q3 226 aa11.17□□□□□ -0.62
COL4A6-207ENST00000487645 A0A096LNT2 108 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 OOEPA6NGQ2 149 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 RNF223E7ERA6 249 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 AKR7A2O43488 359 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 MAS1P04201 325 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 TFAP2AP05549 437 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 TMEM225BP0DP42 221 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 GLRA1P23415 457 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 RBMXP38159 391 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 PTGFRP43088 359 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 PSMD7P51665 324 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 ZP1P60852 638 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 HNRNPA0Q13151 305 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 MICBQ29980 383 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 ZNF404Q494X3 552 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 AVPI1Q5T686 147 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 RNF144BQ7Z419 303 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 LYPD6Q86Y78 171 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 SPICQ8N5J4 248 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 BOLLQ8N9W6 283 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 PNLDC1Q8NA58 520 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 PXT1Q8NFP0 134 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 OR13F1Q8NGS4 319 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 OR51F2Q8NH61 342 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 RFT1Q96AA3 541 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 TMIGD2Q96BF3 282 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 C12orf43Q96C57 262 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 CEP19Q96LK0 163 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 UQCC2Q9BRT2 126 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 HES4Q9HCC6 221 aa11.16□□□□□ -0.62
COL4A6-207ENST00000487645 TXNL4BQ9NX01 149 aaKnown RBP11.16□□□□□ -0.62
COL4A6-207ENST00000487645 IGHV4-61A0A0C4DH41 118 aa11.15□□□□□ -0.62
COL4A6-207ENST00000487645 ISPDA4D126 451 aa11.15□□□□□ -0.62
COL4A6-207ENST00000487645 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
COL4A6-207ENST00000487645 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-207ENST00000487645 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms