RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 GPER1Q99527 375 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 RAB1BQ9H0U4 201 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 FN3KRPQ9HA64 309 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 DECR2Q9NUI1 292 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 IL36GQ9NZH8 169 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 STEAP1Q9UHE8 339 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 POLDIP2Q9Y2S7 368 aa8.08□□□□□ -1.12
MCF2L-227ENST00000486806 IGHV1-69-2A0A0G2JMI3 117 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 A6NLC8 198 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 SPRY1O43609 319 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 ANGPTL7O43827 346 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 NOS1APO75052 506 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 NDUFS7O75251 213 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 KDM4BO94953 1096 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 PLATP00750 562 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 IGHV4-39P01824 125 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 ACAA1P09110 424 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 PGA5P0DJD9 388 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 SLC2A2P11168 524 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 EFNA4P52798 201 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 ERVK11-1P61568 191 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 QRFPP83859 136 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 RAB11BQ15907 218 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 HES5Q5TA89 166 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 AWAT2Q6E213 333 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF826PQ6ZT77 177 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 CROCCP3Q8IVE0 287 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 GCSAMQ8N6F7 178 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 POC1AQ8NBT0 407 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 Q8NFD4 153 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 OR10Z1Q8NGY1 313 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 TBC1D15Q8TC07 691 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 YIPF5Q969M3 257 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 SLAMF9Q96A28 289 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 NRIP2Q9BQI9 281 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 SLIRPQ9GZT3 109 aaKnown RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 LIN7BQ9HAP6 207 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 PLGRKTQ9HBL7 147 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 HES4Q9HCC6 221 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 SMURF1Q9HCE7 757 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 UFSP2Q9NUQ7 469 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 C1orf123Q9NWV4 160 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 DCAF16Q9NXF7 216 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 MTCH1Q9NZJ7 389 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 GHRLQ9UBU3 117 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 DAPK2Q9UIK4 370 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 PPP1R3CQ9UQK1 317 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 PLEKHA6Q9Y2H5 1048 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 MRPS28Q9Y2Q9 187 aaKnown RBP8.07□□□□□ -1.12
MCF2L-227ENST00000486806 CACNG2Q9Y698 323 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 CRYBG3Q68DQ2 2970 aa8.07□□□□□ -1.12
MCF2L-227ENST00000486806 A0A0B4J203 849 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 SRRM5B3KS81 715 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 F8VVB4 439 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 F8VWA3 439 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 IFNL4K9M1U5 179 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 LDLRAD4O15165 306 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 TPD52L2O43399 206 aaKnown RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 LY6HO94772 140 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 BPNT1O95861 308 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 F12P00748 615 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 LHBP01229 141 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 SFTPBP07988 381 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 UBBP0CG47 229 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 TMEM225BP0DP42 221 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF182P17025 639 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 EGR1P18146 543 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 RBMXP38159 391 aaKnown RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 NPBWR2P48146 333 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 RORCP51449 518 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 CLDN12P56749 244 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 SCAND1P57086 179 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 HOXA4Q00056 320 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 DYNC1I2Q13409 638 aaKnown RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 P2RY14Q15391 338 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 DGUOKQ16854 277 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 ELP2Q6IA86 826 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 GLIPR1L1Q6UWM5 242 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 MKXQ8IYA7 352 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 LRRC29Q8WV35 223 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 RDH5Q92781 318 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 HPS1Q92902 700 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 NINJ1Q92982 152 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 KCTD12Q96CX2 325 aaKnown RBP8.06□□□□□ -1.12
MCF2L-227ENST00000486806 MBD6Q96DN6 1003 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 CEP19Q96LK0 163 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 ZNF488Q96MN9 340 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 DCUN1D5Q9BTE7 237 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 KCNK15Q9H427 330 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 RHOFQ9HBH0 211 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 TMEM106BQ9NUM4 274 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 FBLN5Q9UBX5 448 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 UNC79Q9P2D8 2635 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 CELSR2Q9HCU4 2923 aa8.06□□□□□ -1.12
MCF2L-227ENST00000486806 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
MCF2L-227ENST00000486806 A0A1W2PP11 408 aa8.05□□□□□ -1.12
MCF2L-227ENST00000486806 hCG_1807616A0A1W2PRN6 198 aa8.05□□□□□ -1.12
MCF2L-227ENST00000486806 TMEM14DPA8MWL7 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms