RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SCCPDHQ8NBX0 429 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 ZNF420Q8TAQ5 688 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-229ENST00000486665 NDNFQ8TB73 568 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 RAB2BQ8WUD1 216 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 ISOC1Q96CN7 298 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 MDFIQ99750 246 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 EGLN1Q9GZT9 426 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 TLNRD1Q9H1K6 362 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 DECR2Q9NUI1 292 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 CACNG2Q9Y698 323 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
HDAC6-229ENST00000486665 FBN1P35555 2871 aaKnown RBP10.79□□□□□ -0.68
HDAC6-229ENST00000486665 SMIM31A0A1B0GVY4 71 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 LRP5LA4QPB2 252 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 CCDC160A6NGH7 325 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 TRIM64BA6NI03 449 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 LYNX1G3V0Z9 82 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 H3BMQ9 156 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 CDIPTO14735 213 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 SYNGR1O43759 233 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 CDC14BO60729 498 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 RHBDL1O75783 438 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 PLATP00750 562 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 ERCC1P07992 297 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 LYNX1P0DP58 116 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 RAB3BP20337 219 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 ZNF93P35789 620 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 GATA4P43694 442 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 HAAOP46952 286 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 ZP1P60852 638 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 HOXA4Q00056 320 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 PDZK1IP1Q13113 114 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 HAGHLQ6PII5 290 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 ZNF573Q86YE8 665 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 JAGN1Q8N5M9 183 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 OR5D18Q8NGL1 313 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 NEU4Q8WWR8 484 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 AQP3Q92482 292 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 YIPF5Q969M3 257 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 C12orf43Q96C57 262 aaKnown RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 METTL17Q9H7H0 456 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 CNTD2Q9H8S5 307 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 SAP30LQ9HAJ7 183 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 NEK6Q9HC98 313 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 ZNF701Q9NV72 531 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-229ENST00000486665 C1orf123Q9NWV4 160 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 DCAF16Q9NXF7 216 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 EDARQ9UNE0 448 aa10.78□□□□□ -0.68
HDAC6-229ENST00000486665 DSCAMO60469 2012 aa10.77□□□□□ -0.68
HDAC6-229ENST00000486665 CSPG4Q6UVK1 2322 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 IGKV1-12A0A0C4DH73 117 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 A6NLC8 198 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 PDCD5O14737 125 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-229ENST00000486665 ANGPTL7O43827 346 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-229ENST00000486665 IGKV1D-12P01611 117 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 HEXAP06865 529 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 OR3A4PP47883 348 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 POU3F4P49335 361 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 Q5PR19 223 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 C1orf100Q5SVJ3 147 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 GLT8D1Q68CQ7 371 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 FAM166AQ6J272 317 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 TPRA1Q86W33 373 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 CDH26Q8IXH8 852 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 BATF2Q8N1L9 274 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 OR4D6Q8NGJ1 314 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 SLC25A28Q96A46 364 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 ZNF488Q96MN9 340 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 GPER1Q99527 375 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 BCL7BQ9BQE9 202 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 DCSTAMPQ9H295 470 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 CXorf56Q9H5V9 222 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 BEX4Q9NWD9 120 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-229ENST00000486665 NDUFA13Q9P0J0 144 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 RSL24D1Q9UHA3 163 aaKnown RBP10.77□□□□□ -0.69
HDAC6-229ENST00000486665 V9GY05 133 aa10.77□□□□□ -0.69
HDAC6-229ENST00000486665 CUBNO60494 3623 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 F8VVB4 439 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 F8VWA3 439 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 J3QT63 122 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 IL1AP01583 271 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 SLC2A2P11168 524 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-229ENST00000486665 PAX1P15863 534 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 TNFRSF1AP19438 455 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 MPZP25189 248 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 PTGFRP43088 359 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 PSMD7P51665 324 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 EFNA4P52798 201 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 HES5Q5TA89 166 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 USP43Q70EL4 1123 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 SLC25A26Q70HW3 274 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 NKAIN3Q8N8D7 197 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 Q8TCH9 128 aa10.76□□□□□ -0.69
HDAC6-229ENST00000486665 TNFAIP8L1Q8WVP5 186 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms