RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PDZK1IP1Q13113 114 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 MRPL21Q7Z2W9 205 aaKnown RBP17.6■□□□□ 0.41
HPS3-206ENST00000486530 LYG2Q86SG7 212 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 OR56B2PQ8NGI1 322 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 TERB2Q8NHR7 220 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 MRPS24Q96EL2 167 aaKnown RBP17.6■□□□□ 0.41
HPS3-206ENST00000486530 PCDHB16Q9NRJ7 776 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 CLCF1Q9UBD9 225 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 HSF4Q9ULV5 492 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 KCNMB2Q9Y691 235 aa17.6■□□□□ 0.41
HPS3-206ENST00000486530 SIX6O95475 246 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 IL2RAP01589 272 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 CCL2P13500 99 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 ZBTB25P24278 435 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 CD34P28906 385 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 SNU13P55769 128 aaKnown RBP17.59■□□□□ 0.41
HPS3-206ENST00000486530 PER3P56645 1201 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 TAS2R31P59538 309 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 C6orf201Q7Z4U5 140 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 TMEM17Q86X19 198 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 BCL2L2Q92843 193 aaPredicted RBP17.59■□□□□ 0.41
HPS3-206ENST00000486530 CYYR1Q96J86 154 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 ST6GALNAC5Q9BVH7 336 aa17.59■□□□□ 0.41
HPS3-206ENST00000486530 PLSCR5A0PG75 271 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 ZNF850A8MQ14 1090 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 CEACAM18A8MTB9 384 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 C4BPBP20851 252 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 NKAPLQ5M9Q1 402 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 DCAF12L2Q5VW00 463 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 LPCAT3Q6P1A2 487 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 CSNK2A3Q8NEV1 391 aa17.58■□□□□ 0.41
HPS3-206ENST00000486530 EMG1Q92979 244 aaKnown RBP17.58■□□□□ 0.41
HPS3-206ENST00000486530 PAPOLGQ9BWT3 736 aaKnown RBP17.58■□□□□ 0.41
HPS3-206ENST00000486530 NOP16Q9Y3C1 178 aaKnown RBP17.58■□□□□ 0.41
HPS3-206ENST00000486530 FIGNL2A6NMB9 653 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 APLNRP35414 380 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 OR3A3P47888 321 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 FOXC1Q12948 553 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 PPP1R1AQ13522 171 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 HIKESHIQ53FT3 197 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 OSR2Q8N2R0 312 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 ZSCAN4Q8NAM6 433 aaPredicted RBP17.58■□□□□ 0.4
HPS3-206ENST00000486530 OR8H1Q8NGG4 311 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 FN3KRPQ9HA64 309 aa17.58■□□□□ 0.4
HPS3-206ENST00000486530 ASPMQ8IZT6 3477 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 IGKV1-12A0A0C4DH73 117 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 AQP7O14520 342 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 IGKV1D-12P01611 117 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 TAF9Q16594 264 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 SIGIRRQ6IA17 410 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 OR5AP2Q8NGF4 316 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 OR5M8Q8NGP6 311 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 MARCH1Q8TCQ1 289 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 WDR89Q96FK6 387 aaPredicted RBP17.57■□□□□ 0.4
HPS3-206ENST00000486530 SCGB3A2Q96PL1 93 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 HEXA-AS1Q9H8Q6 139 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 GPR160Q9UJ42 338 aa17.57■□□□□ 0.4
HPS3-206ENST00000486530 C9orf170A2RU37 121 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 CST4P01036 141 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 SSTR2P30874 369 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 HTR2BP41595 481 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 TEX261Q6UWH6 196 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 OR51F2Q8NH61 342 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 MITD1Q8WV92 249 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 CLEC4MQ9H2X3 399 aaPredicted RBP17.56■□□□□ 0.4
HPS3-206ENST00000486530 ZNF701Q9NV72 531 aaPredicted RBP17.56■□□□□ 0.4
HPS3-206ENST00000486530 ZNF230Q9UIE0 474 aaPredicted RBP17.56■□□□□ 0.4
HPS3-206ENST00000486530 U3KQ87 197 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 PQLC2LA1A4F0 135 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 FPR2P25090 351 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 CHATP28329 748 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 IL13RA1P78552 427 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 PRDX4Q13162 271 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 CHRFAM7AQ494W8 412 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 LY6G6FQ5SQ64 297 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 RPUSD3Q6P087 351 aaKnown RBP17.56■□□□□ 0.4
HPS3-206ENST00000486530 LHFPL1Q86WI0 220 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 ELMOD3Q96FG2 381 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 POM121Q96HA1 1249 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 PHB2Q99623 299 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 PPA2Q9H2U2 334 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 EDARQ9UNE0 448 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 STARD10Q9Y365 291 aa17.56■□□□□ 0.4
HPS3-206ENST00000486530 ZFHX4Q86UP3 3567 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 HMSDA8MTL9 139 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 KLK10O43240 276 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 NFYAP23511 347 aaPredicted RBP17.55■□□□□ 0.4
HPS3-206ENST00000486530 LIN54Q6MZP7 749 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 TFAP2EQ6VUC0 442 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 ZDHHC23Q8IYP9 409 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 ZNF611Q8N823 705 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 ADAD2Q8NCV1 583 aaKnown RBP17.55■□□□□ 0.4
HPS3-206ENST00000486530 TRIB1Q96RU8 372 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 EHFQ9NZC4 300 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 GPR132Q9UNW8 380 aa17.55■□□□□ 0.4
HPS3-206ENST00000486530 L7N2F9 121 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 NGFP01138 241 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 SFTPBP07988 381 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 AKR1C4P17516 323 aa17.54■□□□□ 0.4
HPS3-206ENST00000486530 SPINK2P20155 84 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms