RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 C12orf76Q8N812 135 aaPredicted RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C9orf106Q8NAJ2 232 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 GJC3Q8NFK1 279 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 VN1R2Q8NFZ6 395 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR2M7Q8NG81 312 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR4F15Q8NGB8 312 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR4D11Q8NGI4 311 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR52H1Q8NGJ2 320 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR2Y1Q8NGV0 311 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR13D1Q8NGV5 346 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 OR5K2Q8NHB8 316 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC7A13Q8TCU3 470 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 C11orf40Q8WZ69 217 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC7A6Q92536 515 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 COX14Q96I36 57 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 KCTD7Q96MP8 289 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM56Q96MV1 263 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC6A7Q99884 636 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF649Q9BS31 505 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 NUDT9Q9BW91 350 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RAB11FIP5Q9BXF6 653 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 POLR2J2Q9GZM3 115 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RNF167Q9H6Y7 350 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 NIPAL2Q9H841 368 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 LHX9Q9NQ69 397 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 BIN3Q9NQY0 253 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SPHK2Q9NRA0 654 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TXNL4BQ9NX01 149 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RNF7Q9UBF6 113 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PLEKHB1Q9UF11 243 aaPredicted RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 CD84Q9UIB8 345 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 PURGQ9UJV8 347 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 RALYQ9UKM9 306 aaKnown RBP3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC7A11Q9UPY5 501 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM56-RWDD3S4R434 201 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 BPTFQ12830 3046 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 LTBP2Q14767 1821 aa3.49□□□□□ -1.85
PRPF38B-205ENST00000485810 HELZP42694 1942 aaKnown RBP3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 TRBV9A0A0B4J1U6 114 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 A0A1W2PPV9 198 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LRP5LA4QPB2 252 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC22A20A6NK97 555 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 B4DXG7 233 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 TRDCB7Z8K6 153 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 C21orf140B9A014 251 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM157AC9JC47 383 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ANHXE9PGG2 379 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 F5H697 171 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 F5H768 121 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 J3QRE1 110 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 TNFSF11O14788 317 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 MYL12BO14950 172 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 MPPED1O15442 326 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 PLA2G10O15496 165 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 DLEU1O43261 78 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 RP2O75695 350 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 POP7O75817 140 aaKnown RBP3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 CDRT1O95170 752 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 EPPINO95925 133 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 MT-CO2P00403 227 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 GAPDHP04406 335 aaKnown RBP3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 BCHEP06276 602 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 CSF3P09919 207 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LINC00271P0C7V0 271 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LIMS3P0CW19 117 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LIMS4P0CW20 117 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 C8orf88P0DMB2 117 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 IRF2P14316 349 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF43P17038 809 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 PVALBP20472 110 aaPredicted RBP3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SERPINA2P20848 420 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 FPR3P25089 353 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 DUSP1P28562 367 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SRD5A2P31213 254 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SDC2P34741 201 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 CCR2P41597 374 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 NR4A2P43354 598 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 HTR5AP47898 357 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 AKR1D1P51857 326 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 PROK1P58294 105 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 BTG1P62324 171 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 PLA2G7Q13093 441 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SF3A2Q15428 464 aaKnown RBP3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ZIC1Q15915 447 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ARHGAP11BQ3KRB8 267 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ZFP69Q49AA0 526 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LY6G6FQ5SQ64 297 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 NXNL2Q5VZ03 156 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 HIST2H2BCQ6DN03 193 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 HIST2H2BDQ6DRA6 164 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 ACSM5Q6NUN0 579 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 UNQ6126/PRO20091Q6UXV3 157 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LINGO2Q7L985 606 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC29A4Q7RTT9 530 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 NOXA1Q86UR1 476 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 SLC34A3Q8N130 599 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 LRRC18Q8N456 261 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 TCEANCQ8N8B7 351 aa3.48□□□□□ -1.85
PRPF38B-205ENST00000485810 POC1AQ8NBT0 407 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms