RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF581Q9P0T4 197 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 ORC6Q9Y5N6 252 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 GMPPBQ9Y5P6 360 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 SIRT4Q9Y6E7 314 aaPredicted RBP4.74□□□□□ -1.65
CUX1-208ENST00000485792 VWFP04275 2813 aa4.74□□□□□ -1.65
CUX1-208ENST00000485792 WNK1Q9H4A3 2382 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 IGKV1D-17A0A075B6S4 117 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 A0A0A6YYJ9 748 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 TRAV38-1A0A0B4J264 116 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 IGHV2-70DA0A0C4DH43 119 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 A0A0G2JMP0 313 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 A0A0X1KG70 313 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 OOEPA6NGQ2 149 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 OR5B21A6NL26 309 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 SNTNA6NMZ2 147 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ZNF850A8MQ14 1090 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 LOC110117498-PIK3R3F6TDL0 507 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 F8VVB4 439 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 F8VWA3 439 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 H3BSH0 61 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 MTRF1O75570 445 aaKnown RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 RHBDL1O75783 438 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 PLATP00750 562 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 KRT8P05787 483 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 PGA5P0DJD9 388 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 PIPP12273 146 aaPredicted RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 FAHP16930 419 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 DCKP27707 260 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 GNG3P63215 75 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 PRB3Q04118 309 aaPredicted RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 RIPK1Q13546 671 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RCN1Q15293 331 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 UBE2V2Q15819 145 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 KRTAP24-1Q3LI83 254 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 KLHL22Q53GT1 634 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 FBLN7Q53RD9 439 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 WDR38Q5JTN6 314 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 CLVS2Q5SYC1 327 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 UTF1Q5T230 341 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RNLSQ5VYX0 342 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 TTC23Q5W5X9 447 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 TCF23Q7RTU1 214 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ZDHHC23Q8IYP9 409 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 PARP16Q8N5Y8 322 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 DNAAF1Q8NEP3 725 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 Q8NFD4 153 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 SEMA6DQ8NFY4 1073 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 OR4M2Q8NGB6 313 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 OR52I1Q8NGK6 324 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ANGPTL6Q8NI99 470 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 CNIH3Q8TBE1 160 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 HAVCR2Q8TDQ0 301 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 UPRTQ96BW1 309 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 SDSLQ96GA7 329 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 Q96MT0 163 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ZNF48Q96MX3 618 aaPredicted RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 GAL3ST1Q99999 423 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RTL8AQ9BWD3 113 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 BEX2Q9BXY8 128 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 CHST5Q9GZS9 411 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 SHARPINQ9H0F6 387 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ISG20L2Q9H9L3 353 aaKnown RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 UNKLQ9H9P5 680 aaKnown RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 UFSP2Q9NUQ7 469 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 C1orf123Q9NWV4 160 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 IMPAD1Q9NX62 359 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RASL12Q9NYN1 266 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 ERVK-18Q9QC07 812 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 IL36RNQ9UBH0 155 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 RPL36Q9Y3U8 105 aaKnown RBP4.73□□□□□ -1.65
CUX1-208ENST00000485792 RNF114Q9Y508 228 aa4.73□□□□□ -1.65
CUX1-208ENST00000485792 LOC105371242A0A075B767 164 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 IGHV3OR15-7A0A075B7D8 119 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 IGKV1-9A0A0C4DH69 117 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 MDFIC2A0A1B0GVS7 189 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 MAGEA13PA6NCF6 341 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 A6NIN4 97 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 ANXA2P2A6NMY6 339 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 P2RY10O00398 339 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 CDIPTO14735 213 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 SIGLEC5O15389 551 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 OGG1O15527 345 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 PHF1O43189 567 aaPredicted RBP4.72□□□□□ -1.65
CUX1-208ENST00000485792 GPX5O75715 221 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 ZFPL1O95159 310 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 FADS2O95864 444 aaKnown RBP4.72□□□□□ -1.65
CUX1-208ENST00000485792 NRASP01111 189 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 CD1AP06126 327 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 LIPFP07098 398 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 GRPP07492 148 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 RPSAP08865 295 aaKnown RBP4.72□□□□□ -1.65
CUX1-208ENST00000485792 UBCP0CG48 685 aaKnown RBP4.72□□□□□ -1.65
CUX1-208ENST00000485792 CD37P11049 281 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 PSG2P11465 335 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 JUNBP17275 347 aaPredicted RBP4.72□□□□□ -1.65
CUX1-208ENST00000485792 SRD5A1P18405 259 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 CAPGP40121 348 aa4.72□□□□□ -1.65
CUX1-208ENST00000485792 GPM6AP51674 278 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms