RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MAP1LC3BQ9GZQ8 125 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 OR51J1Q9H342 316 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 REEP4Q9H6H4 257 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 LRTM1Q9HBL6 345 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 SLCO1B3Q9NPD5 702 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 DUX4Q9UBX2 424 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 TP53TG1Q9Y2A0 90 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 OARD1Q9Y530 152 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 ASTN1O14525 1302 aa3.84□□□□□ -1.79
RTN4-213ENST00000485749 ARHGAP23Q9P227 1491 aa3.84□□□□□ -1.8
RTN4-213ENST00000485749 PHRF1Q9P1Y6 1649 aaKnown RBP3.84□□□□□ -1.8
RTN4-213ENST00000485749 TAF1LQ8IZX4 1826 aa3.84□□□□□ -1.8
RTN4-213ENST00000485749 SERINC4A6NH21 518 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 F5H5K5 113 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 J3KR12 359 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 M0R143 59 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 TAAR5O14804 337 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 GYG2O15488 501 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 P2RX6O15547 441 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ITM2AO43736 263 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 EFNA2O43921 213 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 GADD45GO95257 159 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 IGHG3P01860 377 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 APOA2P02652 100 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ARG1P05089 322 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 UMODP07911 640 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 PAEPP09466 180 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 OR56A5P0C7T3 313 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 GPX2P18283 190 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 CHRNB4P30926 498 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 HRH1P35367 487 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 VHLP40337 213 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ZFP36L2P47974 494 aaKnown RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 HCCSP53701 268 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 KRTAP10-11P60412 298 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 HIST1H3AP68431 136 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 H3F3AP84243 136 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 IFITM2Q01629 132 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 EMX1Q04741 257 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 CDK10Q15131 360 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 CTF1Q16619 201 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 CLEC12BQ2HXU8 276 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 SLC25A35Q3KQZ1 300 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 DCST2Q5T1A1 773 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 DHRS11Q6UWP2 260 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 C12orf54Q6X4T0 127 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 SLC25A48Q6ZT89 311 aaKnown RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 CYS1Q717R9 158 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 HIST2H3AQ71DI3 136 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 HSD11B1LQ7Z5J1 315 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 AMIGO2Q86SJ2 522 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 PIGZQ86VD9 579 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 GLCCI1Q86VQ1 547 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 RAB43Q86YS6 212 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 FBXO16Q8IX29 292 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 C4orf33Q8N1A6 199 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 C12orf45Q8N5I9 185 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 ZNF383Q8NA42 475 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 RELL2Q8NC24 303 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 OR4E2Q8NGC2 313 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 OR4D11Q8NGI4 311 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 RPLP0P6Q8NHW5 317 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 GPR148Q8TDV2 347 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 TRUB1Q8WWH5 349 aaKnown RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 SCMH1Q96GD3 660 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 DCUN1D1Q96GG9 259 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 HSFY1Q96LI6 401 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 CNBD2Q96M20 576 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ZNF778Q96MU6 729 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 P2RX4Q99571 388 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 NKX3-1Q99801 234 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 TAPBPLQ9BX59 468 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 SUCNR1Q9BXA5 334 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 TMEM59Q9BXS4 323 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ABCG5Q9H222 651 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 DCSTAMPQ9H295 470 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 OR51I1Q9H343 314 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 PRORYQ9H606 182 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 FNDC4Q9H6D8 234 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 ELL3Q9HB65 397 aaPredicted RBP3.83□□□□□ -1.8
RTN4-213ENST00000485749 SLC25A19Q9HC21 320 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 B3GAT2Q9NPZ5 323 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 CISHQ9NSE2 258 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 STARD5Q9NSY2 213 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 MSRB1Q9NZV6 116 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 FBXL4Q9UKA2 621 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 SSR3Q9UNL2 185 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 WIPI2Q9Y4P8 454 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 ZMYM2Q9UBW7 1377 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 BCL9O00512 1426 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 PXDNQ92626 1479 aa3.83□□□□□ -1.8
RTN4-213ENST00000485749 UBR1Q8IWV7 1749 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 A0A096LPI6 279 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 SMIM28A0A1B0GU29 152 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 FAM159BA6NKW6 160 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 A8MVM7 634 aa3.82□□□□□ -1.8
RTN4-213ENST00000485749 ZNF814B7Z6K7 855 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms