RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SNRNP70P08621 437 aaKnown RBP4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 CCL5P13501 91 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 NQO2P16083 231 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF43P17038 809 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 BCKDHBP21953 392 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ITGA3P26006 1051 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 IL12BP29460 328 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 AKT2P31751 481 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 GNALP38405 381 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 AKR1C3P42330 323 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 CAPZBP47756 277 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 OR3A4PP47883 348 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ID4P47928 161 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 CAMLGP49069 296 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF133P52736 654 aaPredicted RBP4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 SNU13P55769 128 aaKnown RBP4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 FMODQ06828 376 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 PLCXD2Q0VAA5 305 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 IL13RA2Q14627 380 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 HIKESHIQ53FT3 197 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 GGNBP1Q5YKI7 109 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 SP5Q6BEB4 398 aaPredicted RBP4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 COX15Q7KZN9 410 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 DOK3Q7L591 496 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 C9orf40Q8IXQ3 194 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 YAF2Q8IY57 180 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF101Q8IZC7 436 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 SLC22A18ASQ8N1D0 253 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 TMEM156Q8N614 296 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF321PQ8N8H1 164 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 LINC01356Q8N9X3 169 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 OR10H5Q8NGA6 315 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 MFSD8Q8NHS3 518 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 STT3BQ8TCJ2 826 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF721Q8TF20 911 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 RNF138Q8WVD3 245 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 PATE1Q8WXA2 126 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 TMEM234Q8WY98 164 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 C11orf40Q8WZ69 217 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 SLC25A36Q96CQ1 311 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ARHGAP5-AS1Q96IT6 56 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ABHD14BQ96IU4 210 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 IP6K3Q96PC2 410 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 TGM7Q96PF1 710 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ADOQ96SZ5 270 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 TBL1XR1Q9BZK7 514 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 CHST5Q9GZS9 411 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 OR10A2Q9H208 303 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 C11orf1Q9H5F2 150 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 NAA60Q9H7X0 242 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 KCNJ16Q9NPI9 418 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 SIRT7Q9NRC8 400 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 PARPBPQ9NWS1 579 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 ALKBH4Q9NXW9 302 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 EHFQ9NZC4 300 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 NPIPA1Q9UND3 350 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 HS3ST3A1Q9Y663 406 aa4.1□□□□□ -1.75
SMARCC1-206ENST00000485737 FANCMQ8IYD8 2048 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 UTRNP46939 3433 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 TRBV23-1A0A0A0MS06 115 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 IGKV1D-43A0A0B4J1Z2 117 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 A0A1W2PPE2 198 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 LILRA5A6NI73 299 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RHPN2P1A8MT19 583 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SEC14L6B5MCN3 397 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 MS4A18H0YCH9 400 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 NME2P1O60361 137 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PITX3O75364 302 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 NDUFS6O75380 124 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CRTAPO75718 401 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR2C1O95371 312 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 TNFP01375 233 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PLA2G1BP04054 148 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 KLK3P07288 261 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SFTPBP07988 381 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HLA-DOBP13765 273 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HOXB2P14652 356 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HIST1H1BP16401 226 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF17P17021 662 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 GLRA1P23415 457 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 DTYMKP23919 212 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CTSSP25774 331 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 S100A2P29034 98 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HOXC12P31275 282 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR3A2P47893 321 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF121P58317 390 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RPL11P62913 178 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CSNK2A1P68400 391 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HSF1Q00613 529 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 HHEXQ03014 270 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ACY1Q03154 408 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SQSTM1Q13501 440 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 KIAA0141Q14154 515 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ERV3-1Q14264 604 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 TGIF1Q15583 401 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms