RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PPA2Q9H2U2 334 aa14□□□□□ -0.17
SMC4-216ENST00000485645 GTF2A1LQ9UNN4 478 aa14□□□□□ -0.17
SMC4-216ENST00000485645 A0A1W2PPH5 198 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 RFPL4AA6NLU0 287 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 RFPL4AL1F8VTS6 287 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 ANGPTL7O43827 346 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 PRKYO43930 277 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 TTRP02766 147 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 HAAOP46952 286 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 ACTR3P61158 418 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 EGR3Q06889 387 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 MFGE8Q08431 387 aaPredicted RBP13.99□□□□□ -0.17
SMC4-216ENST00000485645 CLVS2Q5SYC1 327 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 SLC35E4Q6ICL7 350 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 HCP5Q6MZN7 132 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 FAHD1Q6P587 224 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 ZNF322Q6U7Q0 402 aaPredicted RBP13.99□□□□□ -0.17
SMC4-216ENST00000485645 MEPCEQ7L2J0 689 aaKnown RBP13.99□□□□□ -0.17
SMC4-216ENST00000485645 ZNF573Q86YE8 665 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 OR51G2Q8NGK0 314 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 SSX3Q99909 188 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 FAM234AQ9H0X4 552 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 MOB1AQ9H8S9 216 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 C19orf12Q9NSK7 152 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 H2AFY2Q9P0M6 372 aaPredicted RBP13.99□□□□□ -0.17
SMC4-216ENST00000485645 TGP01266 2768 aa13.99□□□□□ -0.17
SMC4-216ENST00000485645 LOC110117498-PIK3R3F6TDL0 507 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 H3BUX3 64 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 SLC1A7O00341 560 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 CIB2O75838 187 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 PGA5P0DJD9 388 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 PRDX2P32119 198 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 CXCR4P61073 352 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 ESRRGP62508 458 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 RPL31P62899 125 aaKnown RBP13.98□□□□□ -0.17
SMC4-216ENST00000485645 SLC35F2Q8IXU6 374 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 MKXQ8IYA7 352 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 ZNF561Q8N587 486 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 OR5K1Q8NHB7 308 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 C17orf50Q8WW18 174 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 ZNF488Q96MN9 340 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 MNTQ99583 582 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 APOL4Q9BPW4 351 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 MEGF9Q9H1U4 602 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 AP4S1Q9Y587 144 aa13.98□□□□□ -0.17
SMC4-216ENST00000485645 ZNF670-ZNF695F2Z2N8 137 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 J3QT63 122 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 DLGAP1O14490 977 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 SYNGR1O43759 233 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 SRSF10O75494 262 aaKnown RBP13.97□□□□□ -0.17
SMC4-216ENST00000485645 GABRA5P31644 462 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 ATP6AP1Q15904 470 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 C2orf68Q2NKX9 166 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 BCL2L15Q5TBC7 163 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 TMEM42Q69YG0 159 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 BCDIN3DQ7Z5W3 292 aaKnown RBP13.97□□□□□ -0.17
SMC4-216ENST00000485645 ELMOD2Q8IZ81 293 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 CD177Q8N6Q3 437 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 TCEANCQ8N8B7 351 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 HEXA-AS1Q9H8Q6 139 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 GPR173Q9NS66 373 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 KRT84Q9NSB2 600 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 OR52A1Q9UKL2 312 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 POLDIP2Q9Y2S7 368 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 R4GMQ9 66 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 V9GYS6 101 aa13.97□□□□□ -0.17
SMC4-216ENST00000485645 hCG_1809904A0A1W2PP81 198 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 A0A1W2PPE2 198 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 A0A1W2PR64 198 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 A0A1W2PRV1 198 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 EBAG9O00559 213 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 MAGEB4O15481 346 aaPredicted RBP13.96□□□□□ -0.17
SMC4-216ENST00000485645 NOS1APO75052 506 aaPredicted RBP13.96□□□□□ -0.17
SMC4-216ENST00000485645 NXPH2O95156 264 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 TSPAN15O95858 294 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 FASP25445 335 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 CEBPDP49716 269 aaPredicted RBP13.96□□□□□ -0.17
SMC4-216ENST00000485645 LY6EQ16553 131 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 LRRC75BQ2VPJ9 315 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 AADACL4Q5VUY2 407 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 NXNL2Q5VZ03 156 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 TMEM200BQ69YZ2 307 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 OR14K1Q8NGZ2 314 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 OR2T27Q8NH04 317 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 FAM110DQ8TAY7 271 aaPredicted RBP13.96□□□□□ -0.17
SMC4-216ENST00000485645 RORBQ92753 470 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 CLN6Q9NWW5 311 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 SNX5Q9Y5X3 404 aa13.96□□□□□ -0.17
SMC4-216ENST00000485645 PRKDCP78527 4128 aaKnown RBP13.96□□□□□ -0.17
SMC4-216ENST00000485645 A0A1B0GTI1 187 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 PQLC2LA1A4F0 135 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 A6NIN4 97 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 M0R129 80 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 FCGR1AP12314 374 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 EFNB1P98172 346 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 AANATQ16613 207 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 SLX4IPQ5VYV7 408 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 PLEKHG7Q6ZR37 379 aa13.95□□□□□ -0.18
SMC4-216ENST00000485645 OR4M1Q8NGD0 313 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms