RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	POLDIP2	Q9Y2S7	368 aa		10.85	□□□□□ -0.67
UBA3-210	ENST00000485424	NOTCH3	Q9UM47	2321 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	COL7A1	Q02388	2944 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	ZNF670-ZNF695	F2Z2N8	137 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424		H3BUX3	64 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	DHRS3	O75911	302 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	HAAO	P46952	286 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	LGALS4	P56470	323 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	CXCR4	P61073	352 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	C2orf68	Q2NKX9	166 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	DMRTC1	Q5HYR2	192 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	BCL2L15	Q5TBC7	163 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	ACP7	Q6ZNF0	438 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	ZNF573	Q86YE8	665 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	PNKD	Q8N490	385 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	ZNF561	Q8N587	486 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	AQP3	Q92482	292 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	FGF23	Q9GZV9	251 aa	Predicted RBP	10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	C16orf95	Q9H693	158 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	KRT84	Q9NSB2	600 aa		10.84	□□□□□ -0.67
UBA3-210	ENST00000485424	IGKV1D-17	A0A075B6S4	117 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	SLC22A31	A6NKX4	558 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	RFPL4A	A6NLU0	287 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	RFPL4AL1	F8VTS6	287 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	DNAJC8	O75937	253 aa	Predicted RBP	10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	NXPH2	O95156	264 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	EGR3	Q06889	387 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	PTGES3	Q15185	160 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	CLVS2	Q5SYC1	327 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	C1QL4	Q86Z23	238 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	SLC35F2	Q8IXU6	374 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	POC1A	Q8NBT0	407 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	BEND2	Q8NDZ0	799 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	OR5K1	Q8NHB7	308 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	MNT	Q99583	582 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	SSX3	Q99909	188 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	HEXA-AS1	Q9H8Q6	139 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	PLEKHA1	Q9HB21	404 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	RAB18	Q9NP72	206 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	GPR173	Q9NS66	373 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	OR14J1	Q9UGF5	321 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	NUFIP1	Q9UHK0	495 aa	Known RBP	10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	COPS3	Q9UNS2	423 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	POMP	Q9Y244	141 aa		10.83	□□□□□ -0.68
UBA3-210	ENST00000485424	TCRBV3S1	A0A5B6	114 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	CCDC182	A6NF36	153 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424		J3QT63	122 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	TSPAN9	O75954	239 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	TTR	P02766	147 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	CSF1	P09603	554 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	GABRA5	P31644	462 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	RPL31	P62899	125 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	ROM1	Q03395	351 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	MFGE8	Q08431	387 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	LY6E	Q16553	131 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	LRRC75B	Q2VPJ9	315 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.82	□□□□□ -0.68
UBA3-210	ENST00000485424		Q6ZTK2	550 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	ASRGL1	Q7L266	308 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	MEPCE	Q7L2J0	689 aa	Known RBP	10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	GID4	Q8IVV7	300 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	TCEANC	Q8N8B7	351 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	DTX3	Q8N9I9	347 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	OR2T27	Q8NH04	317 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	BCAS4	Q8TDM0	211 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	TNFRSF14	Q92956	283 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	SDSL	Q96GA7	329 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	ADI1	Q9BV57	179 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	USE1	Q9NZ43	259 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	ENOPH1	Q9UHY7	261 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	OR52A1	Q9UKL2	312 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	MAB21L2	Q9Y586	359 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	SNX5	Q9Y5X3	404 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424		R4GMQ9	66 aa		10.82	□□□□□ -0.68
UBA3-210	ENST00000485424	DNAH3	Q8TD57	4116 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424		G3V2T6	193 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	DLGAP1	O14490	977 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	PRKY	O43930	277 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	KRT8	P05787	483 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	PRDX2	P32119	198 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	DAP	P51397	102 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	ERVFRD-1	P60508	538 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	NXNL2	Q5VZ03	156 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	SLC35E4	Q6ICL7	350 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	MKX	Q8IYA7	352 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	YIPF7	Q8N8F6	280 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	OR4C13	Q8NGP0	309 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	OR2T6	Q8NHC8	308 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	ZNF488	Q96MN9	340 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	APOL4	Q9BPW4	351 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	C19orf12	Q9NSK7	152 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	ZNF222	Q9UK12	451 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	SLC7A11	Q9UPY5	501 aa		10.81	□□□□□ -0.68
UBA3-210	ENST00000485424	FAM230A	A0A1W2PPH8	454 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	SYNGR1	O43759	233 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	RPP14	O95059	124 aa	Known RBP	10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	IGLV3-1	P01715	115 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	PGA5	P0DJD9	388 aa		10.8	□□□□□ -0.68
UBA3-210	ENST00000485424	ATP6V1E1	P36543	226 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms