RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PITPNAQ00169 270 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 DAZAP2Q15038 168 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 RNASE12Q5GAN4 147 aaKnown RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 FAM76BQ5HYJ3 339 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 SLC25A26Q70HW3 274 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 CDH24Q86UP0 819 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ZNF843Q8N446 348 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ZNF611Q8N823 705 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ZSCAN4Q8NAM6 433 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ACBD4Q8NC06 268 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 Q8NFD4 153 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 OR52I2Q8NH67 350 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 CPNE2Q96FN4 548 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 MICU1Q9BPX6 476 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 THAP7Q9BT49 309 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ADAT1Q9BUB4 502 aaKnown RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 TM2D1Q9BX74 207 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 MRPL37Q9BZE1 423 aaKnown RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 METTL9Q9H1A3 318 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 AUNIPQ9H7T9 357 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 DIABLOQ9NR28 239 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM100Q9NV29 134 aa8.6□□□□□ -1.03
HDAC6-226ENST00000483656 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
HDAC6-226ENST00000483656 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 METTL21EPA6NDL7 271 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SHISA9B4DS77 424 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 F8VVB4 439 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 F8VWA3 439 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 HTR3BO95264 441 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 CD3GP09693 182 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 MPZP25189 248 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 LOXP28300 417 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 HAAOP46952 286 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 NPBWR2P48146 333 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 GUCA2AQ02747 115 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 RSU1Q15404 277 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 OR8G1Q15617 311 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 ZNF260Q3ZCT1 412 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 PLAC9Q5JTB6 97 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 HAGHLQ6PII5 290 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM200AQ86VY9 491 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SAXO1Q8IYX7 474 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 OR10R2Q8NGX6 335 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 OR51F2Q8NH61 342 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 CHPT1Q8WUD6 406 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SMIM4Q8WVI0 70 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 AQP3Q92482 292 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SLAMF9Q96A28 289 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 MRPL24Q96A35 216 aaKnown RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 PLPPR2Q96GM1 343 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 Q96M66 194 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SYT3Q9BQG1 590 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 NUDT16L1Q9BRJ7 211 aaKnown RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 RTL8AQ9BWD3 113 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 TMEM59Q9BXS4 323 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 SELENOIQ9C0D9 397 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 CST11Q9H112 138 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 ELL3Q9HB65 397 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 MSL2Q9HCI7 577 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 MTCH1Q9NZJ7 389 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 ZNF581Q9P0T4 197 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 RBMX2Q9Y388 322 aaKnown RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 DIDO1Q9BTC0 2240 aaKnown RBP8.59□□□□□ -1.03
HDAC6-226ENST00000483656 PTPN13Q12923 2485 aa8.59□□□□□ -1.03
HDAC6-226ENST00000483656 RELNP78509 3460 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 LINC00854A0A1B0GVQ3 168 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-226ENST00000483656 LRP5LA4QPB2 252 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 ZSCAN5BA6NJL1 495 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 F5H5P2 479 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 GABARAPH6UMI1 98 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 SSX4O60224 188 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 RHBDL1O75783 438 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 CLDN14O95500 239 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 CHRM2P08172 466 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 MELTFP08582 738 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 SPNP16150 400 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 BCL3P20749 454 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 AGAP20933 346 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 RFX2P48378 723 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 KLF3P57682 345 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-226ENST00000483656 RPS23P62266 143 aaKnown RBP8.58□□□□□ -1.04
HDAC6-226ENST00000483656 SCN1BQ07699 218 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 MAB21L1Q13394 359 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 ASAH1Q13510 395 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 OXA1LQ15070 435 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 RGS21Q2M5E4 152 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 CDNFQ49AH0 187 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 SIGIRRQ6IA17 410 aa8.58□□□□□ -1.04
HDAC6-226ENST00000483656 RAB12Q6IQ22 244 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms