RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 OR4M1Q8NGD0 313 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 OR8S1Q8NH09 359 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 AQP3Q92482 292 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 HIST1H2AAQ96QV6 131 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 GPER1Q99527 375 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 PKIBQ9C010 78 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 LPAR5Q9H1C0 372 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CXXC4Q9H2H0 198 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 RHBDL2Q9NX52 303 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 CISD1Q9NZ45 108 aaKnown RBP6.99□□□□□ -1.29
USP4-210ENST00000483212 MTCH1Q9NZJ7 389 aa6.99□□□□□ -1.29
USP4-210ENST00000483212 LRRK2Q5S007 2527 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 RAI1Q7Z5J4 1906 aaPredicted RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 A0A0A6YYD4 124 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 C17orf100A8MU93 164 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 B9A039 149 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 F8VVB4 439 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 F8VWA3 439 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 RGS5O15539 181 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 SPRY3O43610 288 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 CDC14BO60729 498 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 CTAG2O75638 210 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 RHBDL1O75783 438 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 PLATP00750 562 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 SFTPBP07988 381 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ACAA1P09110 424 aaPredicted RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 DANCRP0C864 163 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 TMEM225BP0DP42 221 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 S100A5P33763 92 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 MNDAP41218 407 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 GATA4P43694 442 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 NPBWR2P48146 333 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ART1P52961 327 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 SELENOVP59797 346 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ERVK11-1P61568 191 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 MPPED2Q15777 294 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ZNF79Q15937 498 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 PRAMEF6Q5VXH4 476 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 CNIH2Q6PI25 160 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 HAGHLQ6PII5 290 aaPredicted RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 CDH24Q86UP0 819 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ZNF573Q86YE8 665 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 CELF2-AS1Q8N7Q2 184 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 SCCPDHQ8NBX0 429 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 OR2Z1Q8NG97 314 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 OR10K1Q8NGX5 313 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ELMOD3Q96FG2 381 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 CYYR1Q96J86 154 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 SDHCQ99643 169 aaPredicted RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 TM2D1Q9BX74 207 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 METTL9Q9H1A3 318 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 EXTL2Q9UBQ6 330 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ZDHHC8Q9ULC8 765 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 ING4Q9UNL4 249 aa6.98□□□□□ -1.29
USP4-210ENST00000483212 HEATR1Q9H583 2144 aaKnown RBP6.98□□□□□ -1.29
USP4-210ENST00000483212 IGHV3-64DA0A0J9YX35 117 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 PLSCR5A0PG75 271 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 VSTM5A8MXK1 200 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 CLDN25C9JDP6 229 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 C3orf80F5H4A9 247 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 M0R233 179 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 RAB27BO00194 218 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 CDIPTO14735 213 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 HS3ST1O14792 307 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 NOS1APO75052 506 aaPredicted RBP6.97□□□□□ -1.29
USP4-210ENST00000483212 MPIG6BO95866 241 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 CD8AP01732 235 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 GRPP07492 148 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 PGA5P0DJD9 388 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 MGMTP16455 207 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 BCL3P20749 454 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 PMELP40967 661 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 PTH2RP49190 550 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 RPS27AP62979 156 aaKnown RBP6.97□□□□□ -1.29
USP4-210ENST00000483212 ZNF45Q02386 682 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 NKPD1Q17RQ9 610 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 MOGAT2Q3SYC2 334 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 SLC22A6Q4U2R8 563 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 NHLRC3Q5JS37 347 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 ELP2Q6IA86 826 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 METAP1DQ6UB28 335 aaPredicted RBP6.97□□□□□ -1.29
USP4-210ENST00000483212 WDR82Q6UXN9 313 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 RTN4RL2Q86UN3 420 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 DTX2Q86UW9 622 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 MUC15Q8N387 334 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 FAM89BQ8N5H3 189 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 DTX3Q8N9I9 347 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 POC1AQ8NBT0 407 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 OR51F2Q8NH61 342 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 KCNG3Q8TAE7 436 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 ITLN1Q8WWA0 313 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 IGFBPL1Q8WX77 278 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 S100ZQ8WXG8 99 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 RAB40AQ8WXH6 277 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 FAM46BQ96A09 425 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 SLAMF9Q96A28 289 aa6.97□□□□□ -1.29
USP4-210ENST00000483212 DIRAS2Q96HU8 199 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms