RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SLC29A1Q99808 456 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 ACOXLQ9NUZ1 547 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 ONECUT1Q9UBC0 465 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 DUX4Q9UBX2 424 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 SLC25A10Q9UBX3 287 aaPredicted RBP11.48□□□□□ -0.57
VARS-225ENST00000482996 POLDIP2Q9Y2S7 368 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
VARS-225ENST00000482996 TENM1Q9UKZ4 2725 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 LOC100130705A0A1B0GUX0 176 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 PQLC2LA1A4F0 135 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 A6NIN4 97 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 SLC16A6O15403 523 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 SERPINA3P01011 423 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 ACAA1P09110 424 aaPredicted RBP11.47□□□□□ -0.57
VARS-225ENST00000482996 PSG2P11465 335 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 NDUFB7P17568 137 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 ISL1P61371 349 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 CDONQ4KMG0 1287 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 TMEM244Q5VVB8 128 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 BRD3OSQ6XYD6 125 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 POC1AQ8NBT0 407 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 NRG4Q8WWG1 115 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 GATAD2BQ8WXI9 593 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 DCTN5Q9BTE1 182 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 SIRPDQ9H106 197 aa11.47□□□□□ -0.57
VARS-225ENST00000482996 LOC107986453A0A1B0GWG9 222 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 TMEM89A2RUT3 159 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 H3BSH0 61 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 J3QRE1 110 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 SYNGR1O43759 233 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 NXPH2O95156 264 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 HTR1AP08908 422 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 PGA5P0DJD9 388 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 SELLP14151 372 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 CAV3P56539 151 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ACTA2P62736 377 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ACTG2P63267 376 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 DGUOKQ16854 277 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ACP7Q6ZNF0 438 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ENTHD1Q8IYW4 607 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 PRSS35Q8N3Z0 413 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 KIR3DL3Q8N743 410 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 ZNF555Q8NEP9 628 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 TMEM185AQ8NFB2 350 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 OR2G2Q8NGZ5 317 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 RHOXF1Q8NHV9 184 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 LHX4Q969G2 390 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 SLC25A28Q96A46 364 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 C10orf35Q96D05 121 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 LGALS12Q96DT0 336 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 RDH12Q96NR8 316 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 FAM118AQ9NWS6 357 aa11.46□□□□□ -0.57
VARS-225ENST00000482996 SMPD3Q9NY59 655 aaPredicted RBP11.46□□□□□ -0.57
VARS-225ENST00000482996 EXOGQ9Y2C4 368 aaKnown RBP11.46□□□□□ -0.57
VARS-225ENST00000482996 IGKV1D-17A0A075B6S4 117 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 FAM230AA0A1W2PPH8 454 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 A0A1W2PQ09 198 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 H0YJX3 145 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 CLDN34H7C241 214 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 J3QLW9 94 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 NOS1APO75052 506 aaPredicted RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 FADS2O95864 444 aaKnown RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 TFF1P04155 84 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 DBTP11182 482 aaKnown RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 ZNF19P17023 458 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 GABRB1P18505 474 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 MPZP25189 248 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 KIR3DL2P43630 455 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 COMPP49747 757 aaPredicted RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 FUT6P51993 359 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 CAPZA1P52907 286 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 AQP4P55087 323 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 OR12D2P58182 307 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 CNN3Q15417 329 aaKnown RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 DEFB112Q30KQ8 113 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 FDX2Q6P4F2 183 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 C8orf46Q8TAG6 207 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 TRMT10AQ8TBZ6 339 aaKnown RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 NPRL2Q8WTW4 380 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 PP6455Q8WZ26 134 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 SDSLQ96GA7 329 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 ZNF488Q96MN9 340 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 PKIBQ9C010 78 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 CHST5Q9GZS9 411 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 AASSQ9UDR5 926 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
VARS-225ENST00000482996 SOX21Q9Y651 276 aaPredicted RBP11.45□□□□□ -0.58
VARS-225ENST00000482996 TRBV23-1A0A0A0MS06 115 aa11.44□□□□□ -0.58
VARS-225ENST00000482996 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
VARS-225ENST00000482996 RFPL4AA6NLU0 287 aa11.44□□□□□ -0.58
VARS-225ENST00000482996 RFPL4AL1F8VTS6 287 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms