RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 BVESQ8NE79 360 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 ST8SIA2Q92186 375 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 PHB2Q99623 299 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 SELENOIQ9C0D9 397 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 WNT5BQ9H1J7 359 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 KANTRA0A1W2PQU2 76 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 C9orf170A2RU37 121 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 PLATP00750 562 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 IFNA6P05013 189 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 GNB3P16520 340 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 HRH1P35367 487 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 IL13RA1P78552 427 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 GLIPR1L1Q6UWM5 242 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 PGAP1Q75T13 922 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 MRGPRFQ96AM1 343 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
CHD3-211ENST00000481999 COQ3Q9NZJ6 369 aa12.57□□□□□ -0.4
CHD3-211ENST00000481999 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 LOC100509620A0A075B734 347 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 A0A0A6YYD4 124 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 LCATP04180 440 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 CCL1P22362 96 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
CHD3-211ENST00000481999 SOX8P57073 446 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 ARF1P84077 181 aaKnown RBP12.56□□□□□ -0.4
CHD3-211ENST00000481999 SMUG1Q53HV7 270 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 DOK3Q7L591 496 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 OR1F12Q8NHA8 337 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 INTS12Q96CB8 462 aaKnown RBP12.56□□□□□ -0.4
CHD3-211ENST00000481999 GPER1Q99527 375 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 PRSS50Q9UI38 385 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 KALRNO60229 2985 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 BET1O15155 118 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 EFSO43281 561 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 IGLV3-1P01715 115 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 CEACAM1P13688 526 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 CTSSP25774 331 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 GCNT2Q8N0V5 402 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 PPP1R1CQ8WVI7 109 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 HAS2Q92819 552 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 DMRTA2Q96SC8 542 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 SHARPINQ9H0F6 387 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 MRPS28Q9Y2Q9 187 aaKnown RBP12.56□□□□□ -0.4
CHD3-211ENST00000481999 KCNK7Q9Y2U2 307 aa12.56□□□□□ -0.4
CHD3-211ENST00000481999 CCSO14618 274 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 BCL2L11O43521 198 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 SSX5O60225 188 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 DHRS3O75911 302 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 MPIG6BO95866 241 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 FAM189A2Q15884 450 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 BATF2Q8N1L9 274 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 KCNG3Q8TAE7 436 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 ST8SIA4Q92187 359 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 SEC22AQ96IW7 307 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 RASL12Q9NYN1 266 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 GLS2Q9UI32 602 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
CHD3-211ENST00000481999 OR2AT4A6NND4 320 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 SYNGR4O95473 234 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
CHD3-211ENST00000481999 CST2P09228 141 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 RAB35Q15286 201 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 LRRC37A5PQ49AS3 106 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 PDSS1Q5T2R2 415 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 ACOT7LQ6ZUV0 252 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 VRK1Q99986 396 aaPredicted RBP12.55□□□□□ -0.4
CHD3-211ENST00000481999 LPAR5Q9H1C0 372 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
CHD3-211ENST00000481999 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 SOCS1O15524 211 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
CHD3-211ENST00000481999 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
CHD3-211ENST00000481999 VAMP1P23763 118 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 TAS2R31P59538 309 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 CLN3Q13286 438 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 KISS1Q15726 138 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 OR4K15Q8NH41 348 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 PHYHIPLQ96FC7 376 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 TRGV5A0A0B4J1U4 118 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 OR6C6A6NF89 314 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 FAM25EA8MYX2 175 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 ATP1B3P54709 279 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 ZNF92Q03936 586 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 ACTBL2Q562R1 376 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 RIPPLY2Q5TAB7 128 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 HOGA1Q86XE5 327 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 RELL2Q8NC24 303 aaPredicted RBP12.54□□□□□ -0.4
CHD3-211ENST00000481999 THAP6Q8TBB0 222 aa12.54□□□□□ -0.4
CHD3-211ENST00000481999 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms