RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ETV3LQ6ZN32 361 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 ATG4DQ86TL0 474 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-216ENST00000481242 CCDC190Q86UF4 302 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 FAM181AQ8N9Y4 354 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 FBXO34Q9NWN3 711 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 THYN1Q9P016 225 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 A0A1B0GUH1 482 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 A0A1W2PPV9 198 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 KIR2DS2P43631 304 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 PRDX4Q13162 271 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
GARNL3-216ENST00000481242 SPATA46Q5T0L3 261 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 XAF1Q6GPH4 301 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 CBLN3Q6UW01 205 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 WDFY2Q96P53 400 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 SLIRPQ9GZT3 109 aaKnown RBP8.43□□□□□ -1.06
GARNL3-216ENST00000481242 CA10Q9NS85 328 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 FKBP11Q9NYL4 201 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 ICAM5Q9UMF0 924 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 SVILO95425 2214 aa8.43□□□□□ -1.06
GARNL3-216ENST00000481242 C20orf202A1L168 122 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SHISA8B8ZZ34 492 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 RPA2P15927 270 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 OR10K2Q6IF99 312 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ACOT7LQ6ZUV0 252 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ZFP82Q8N141 532 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 OR2G3Q8NGZ4 309 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TSPAN32Q96QS1 320 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 RNF167Q9H6Y7 350 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 MIOXQ9UGB7 285 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ING1Q9UK53 422 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 PILRBQ9UKJ0 227 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SHANK3Q9BYB0 1731 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 KIAA1217Q5T5P2 1943 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 XKRY2A2RUG3 117 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 C16orf97H3BN30 126 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 RER1O15258 196 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 COX5AP20674 150 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 BRS3P32247 399 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 PTGFRP43088 359 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 GNB1P62873 340 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 DGCR2P98153 550 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TMEM41BQ5BJD5 291 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 B3GNTL1Q67FW5 361 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ZNF774Q6NX45 483 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 C8orf82Q6P1X6 216 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 MFSD4AQ8N468 514 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 OR2M7Q8NG81 312 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TMEM230Q96A57 120 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 NEIL1Q96FI4 390 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 C2orf50Q96LR7 162 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TUBG2Q9NRH3 451 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 RPH3ALQ9UNE2 315 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 EXOGQ9Y2C4 368 aaKnown RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 COL4A5P29400 1685 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CDX4O14627 284 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 PDCD6O75340 191 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 LYZL6O75951 148 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 MMP15P51511 669 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TMEM128Q5BJH2 165 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 WDR38Q5JTN6 314 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SPANXN5Q5MJ07 72 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ALKAL2Q6UX46 152 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ARSGQ96EG1 525 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ACTR3CQ9C0K3 210 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SLC6A13Q9NSD5 602 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 OR6C68A6NDL8 312 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CBY3A6NI87 242 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CA11O75493 328 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SP9P0CG40 484 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CPN1P15169 458 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 GNB3P16520 340 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ETFRF1Q6IPR1 90 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SLC23A3Q6PIS1 610 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ASCL5Q7RTU5 278 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 MOB3BQ86TA1 216 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 PTPMT1Q8WUK0 201 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CHRDL1Q9BU40 450 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 SAMD10Q9BYL1 202 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ZNF275Q9NSD4 429 aaPredicted RBP8.42□□□□□ -1.06
GARNL3-216ENST00000481242 CES1P1Q9UKY3 287 aa8.42□□□□□ -1.06
GARNL3-216ENST00000481242 ATG2BQ96BY7 2078 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 SH2D7A6NKC9 451 aaPredicted RBP8.41□□□□□ -1.06
GARNL3-216ENST00000481242 SDCBPO00560 298 aaPredicted RBP8.41□□□□□ -1.06
GARNL3-216ENST00000481242 GPR37O15354 613 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 SNRNP70P08621 437 aaKnown RBP8.41□□□□□ -1.06
GARNL3-216ENST00000481242 OR10J4P0C629 311 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 LIFP15018 202 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 NME2P22392 152 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 HRH1P35367 487 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 SRP14P37108 136 aaKnown RBP8.41□□□□□ -1.06
GARNL3-216ENST00000481242 PIGPP57054 158 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 FOXO1Q12778 655 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 ZNF273Q14593 569 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 P2RY6Q15077 328 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 AARDQ4LEZ3 155 aa8.41□□□□□ -1.06
GARNL3-216ENST00000481242 C20orf141Q9NUB4 165 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms