RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 DUX4Q9UBX2 424 aa17.27■□□□□ 0.36
NELFE-208ENST00000481121 DIMT1Q9UNQ2 313 aaKnown RBP17.27■□□□□ 0.36
NELFE-208ENST00000481121 KIR2DS1A0A191URI9 304 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 TMEM212A6NML5 194 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 OR2AT4A6NND4 320 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 TCF21O43680 179 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 SYNGR1O43759 233 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 ETV1P50549 477 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 OR51A4Q8NGJ6 313 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 OR10AC1Q8NH08 325 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 CAB39Q9Y376 341 aaPredicted RBP17.26■□□□□ 0.35
NELFE-208ENST00000481121 E9PI62 339 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 NDUFB3O43676 98 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 FCN3O75636 299 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 PGA5P0DJD9 388 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 MPZP25189 248 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 FUT6P51993 359 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 IKZF1Q13422 519 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 MED21Q13503 144 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 SMIM21Q3B7S5 101 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 ATPAF1Q5TC12 328 aaPredicted RBP17.26■□□□□ 0.35
NELFE-208ENST00000481121 TMPRSS11AQ6ZMR5 421 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 CALHM1Q8IU99 346 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 PNLDC1Q8NA58 520 aaKnown RBP17.26■□□□□ 0.35
NELFE-208ENST00000481121 OR5AK2Q8NH90 309 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 ANGPTL6Q8NI99 470 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 NRG4Q8WWG1 115 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 FGGYQ96C11 551 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 BORCS8Q96FH0 119 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 TMEM80Q96HE8 168 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 ZNF488Q96MN9 340 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 PKIBQ9C010 78 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 RASL12Q9NYN1 266 aa17.26■□□□□ 0.35
NELFE-208ENST00000481121 EXOSC1Q9Y3B2 195 aaKnown RBP17.26■□□□□ 0.35
NELFE-208ENST00000481121 ZFPL1O95159 310 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 ECDO95905 644 aaPredicted RBP17.25■□□□□ 0.35
NELFE-208ENST00000481121 RPSAP08865 295 aaKnown RBP17.25■□□□□ 0.35
NELFE-208ENST00000481121 PPIAL4GP0DN37 164 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 AMY2BP19961 511 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 GABRA2P47869 451 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 TGM4P49221 684 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 IL13RA1P78552 427 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 C11orf91Q3C1V1 193 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 LRRC10Q5BKY1 277 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 ZNF788Q6ZQV5 615 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 UTS2BQ765I0 119 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 BTN2A1Q7KYR7 527 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 ANGPTL5Q86XS5 388 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 TFAP2CQ92754 450 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 GAFA1Q96PS6 74 aa17.25■□□□□ 0.35
NELFE-208ENST00000481121 TRBV2A0A0J9YWF9 115 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 NOS1APO75052 506 aaPredicted RBP17.24■□□□□ 0.35
NELFE-208ENST00000481121 NXPH2O95156 264 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 TFF1P04155 84 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 LIPFP07098 398 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 OCM2P0CE71 109 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 OCMP0CE72 109 aaPredicted RBP17.24■□□□□ 0.35
NELFE-208ENST00000481121 PIPP12273 146 aaPredicted RBP17.24■□□□□ 0.35
NELFE-208ENST00000481121 AQP4P55087 323 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 IL24Q13007 206 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 OR2G6Q5TZ20 316 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 ACP7Q6ZNF0 438 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 FGFRL1Q8N441 504 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 MED30Q96HR3 178 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 PDCD1LG2Q9BQ51 273 aa17.24■□□□□ 0.35
NELFE-208ENST00000481121 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
NELFE-208ENST00000481121 IGKV1-27A0A075B6S5 117 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 EFCAB10A6NFE3 127 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 GPR37O15354 613 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 PLATP00750 562 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 PSG2P11465 335 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 SELLP14151 372 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 AZGP1P25311 298 aaKnown RBP17.23■□□□□ 0.35
NELFE-208ENST00000481121 GTF2A1P52655 376 aaPredicted RBP17.23■□□□□ 0.35
NELFE-208ENST00000481121 FGF12P61328 243 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 BPIFB2Q8N4F0 458 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 DNAAF1Q8NEP3 725 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 ZNF418Q8TF45 676 aaPredicted RBP17.23■□□□□ 0.35
NELFE-208ENST00000481121 FBLIM1Q8WUP2 373 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 TSEN15Q8WW01 171 aaKnown RBP17.23■□□□□ 0.35
NELFE-208ENST00000481121 GGHQ92820 318 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 UPRTQ96BW1 309 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 MDFIQ99750 246 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 NRIP2Q9BQI9 281 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 VCX3BQ9H321 246 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 CNOT2Q9NZN8 540 aaKnown RBP17.23■□□□□ 0.35
NELFE-208ENST00000481121 NUP50Q9UKX7 468 aa17.23■□□□□ 0.35
NELFE-208ENST00000481121 IGKV1D-17A0A075B6S4 117 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 TRAV40A0A0B4J280 105 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 RNF212BA8MTL3 300 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 H0YJX3 145 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 SIGLEC5O15389 551 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 XPNPEP2O43895 674 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 ATF1P18846 271 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 PRKACBP22694 351 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 RBP2P50120 134 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 SRSF2Q01130 221 aaKnown RBP17.22■□□□□ 0.35
NELFE-208ENST00000481121 ST3GAL4Q11206 333 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 CCDC58Q4VC31 144 aa17.22■□□□□ 0.35
NELFE-208ENST00000481121 KLF17Q5JT82 389 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms