RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ZNF732B4DXR9 585 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 PPP5D1E7EU14 171 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 ETV2O00321 342 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 CCL16O15467 120 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 HSPA12AO43301 675 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 PITX3O75364 302 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 APBB3O95704 486 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 H2BFMP0C1H6 154 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 FUT3P21217 361 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 DUSP1P28562 367 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 SFTPDP35247 375 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 SLC6A8P48029 635 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 CSNK1A1P48729 337 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 IGLV3-21P80748 117 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 PAX5Q02548 391 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 TMEM187Q14656 261 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 TCEA2Q15560 299 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 CBLN3Q6UW01 205 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 TGIF2LYQ8IUE0 185 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 FBXL14Q8N1E6 418 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 ZNF283Q8N7M2 679 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 BOD1Q96IK1 185 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 OPN3Q9H1Y3 402 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 OR10A2Q9H208 303 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 HSF4Q9ULV5 492 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 COA3Q9Y2R0 106 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 FREM3P0C091 2139 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 STMND1H3BQB6 276 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 HRKO00198 91 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 GNRH1P01148 92 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 RPLP1P05386 114 aaKnown RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 ZNF43P17038 809 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 BCKDHBP21953 392 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 MSX1P28360 303 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 GPR3P46089 330 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 CEBPGP53567 150 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 EWSR1Q01844 656 aaKnown RBP eCLIP9.36□□□□□ -0.91
SIK3-210ENST00000480468 EIF3IQ13347 325 aaKnown RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 DNM1P34Q6PK57 102 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 GATSQ8NAP1 163 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 C16orf52Q8NHV5 167 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
SIK3-210ENST00000480468 CABLES2Q9BTV7 478 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 PBOV1Q9GZY1 135 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 ZNF700Q9H0M5 742 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 MYOTQ9UBF9 498 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 PADI1Q9ULC6 663 aa9.36□□□□□ -0.91
SIK3-210ENST00000480468 CDC14CA4D256 554 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 LINC01553A4QN01 128 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 TP53I11O14683 189 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 XRCC2O43543 280 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 CXCL10P02778 98 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 ZNF20P17024 532 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 MRPS11P82912 194 aaKnown RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 TLE4Q04727 773 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 FUT7Q11130 342 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 NNATQ16517 81 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 FAM90A2PQ658T7 463 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
SIK3-210ENST00000480468 ZNF573Q86YE8 665 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 CPAMD8Q8IZJ3 1885 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 DAZLQ92904 295 aaKnown RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 TMEM18Q96B42 140 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 ZNF524Q96C55 264 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 TBL1XR1Q9BZK7 514 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 BANF2Q9H503 90 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 C11orf1Q9H5F2 150 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 NAA60Q9H7X0 242 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 P4HTMQ9NXG6 502 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 HIDE1A8MVS5 230 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 SCDO00767 359 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 CRTAPO75718 401 aaPredicted RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 MPZL1O95297 269 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 DIRAS3O95661 229 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 CEACAM1P13688 526 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 DRD3P35462 400 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 ALDH3B1P43353 468 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 OR3A4PP47883 348 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 RPL23AP62750 156 aaKnown RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 COL10A1Q03692 680 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 MESP2Q0VG99 397 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 GNMTQ14749 295 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 THEM4Q5T1C6 240 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 AGBL4Q5VU57 503 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 KLHL24Q6TFL4 600 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 FBXW12Q6X9E4 464 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 GALNTL5Q7Z4T8 443 aa9.35□□□□□ -0.91
SIK3-210ENST00000480468 MAML2Q8IZL2 1156 aaPredicted RBP9.35□□□□□ -0.91
SIK3-210ENST00000480468 ZFP62Q8NB50 900 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms