RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CALHM1Q8IU99 346 aa16.53■□□□□ 0.24
LIME1-205ENST00000480139 POC1AQ8NBT0 407 aa16.53■□□□□ 0.24
LIME1-205ENST00000480139 OR14A2Q96R54 314 aa16.53■□□□□ 0.24
LIME1-205ENST00000480139 TMEM246Q9BRR3 403 aa16.53■□□□□ 0.24
LIME1-205ENST00000480139 PATZ1Q9HBE1 687 aaKnown RBP16.53■□□□□ 0.24
LIME1-205ENST00000480139 CEACAM18A8MTB9 384 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 F5H0A9 414 aaPredicted RBP16.52■□□□□ 0.24
LIME1-205ENST00000480139 SC5DO75845 299 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 ZNF205O95201 554 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 PGA5P0DJD9 388 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 IGFBP3P17936 291 aaPredicted RBP16.52■□□□□ 0.24
LIME1-205ENST00000480139 PSMA1P25786 263 aaKnown RBP16.52■□□□□ 0.24
LIME1-205ENST00000480139 MICBQ29980 383 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 ANGPTL5Q86XS5 388 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 CPNE2Q96FN4 548 aaPredicted RBP16.52■□□□□ 0.24
LIME1-205ENST00000480139 DERL3Q96Q80 235 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 RASL12Q9NYN1 266 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 TAS2R4Q9NYW5 299 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 CKLFQ9UBR5 152 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 PCDHB10Q9UN67 800 aa16.52■□□□□ 0.24
LIME1-205ENST00000480139 C3orf80F5H4A9 247 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 TNFRSF13BO14836 293 aaPredicted RBP16.51■□□□□ 0.23
LIME1-205ENST00000480139 AKR7A2O43488 359 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 SYNGR1O43759 233 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 CD5LO43866 347 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 ALDOBP05062 364 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 MTCP1P56278 107 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 PPP3R1P63098 170 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
LIME1-205ENST00000480139 CYB5R2Q6BCY4 276 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 SFRP4Q6FHJ7 346 aaPredicted RBP16.51■□□□□ 0.23
LIME1-205ENST00000480139 UNQ9370/PRO34162Q6UXP9 181 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 FAM90A1Q86YD7 464 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 PHC2Q8IXK0 858 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 BOLLQ8N9W6 283 aaKnown RBP16.51■□□□□ 0.23
LIME1-205ENST00000480139 NRIP2Q9BQI9 281 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 TMED9Q9BVK6 235 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 MIOXQ9UGB7 285 aa16.51■□□□□ 0.23
LIME1-205ENST00000480139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.51■□□□□ 0.235e-7■■□□□ 14.4
LIME1-205ENST00000480139 B4DSR2 109 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 HCKP08631 526 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 GLRA1P23415 457 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 GABRA5P31644 462 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 ERVK11-1P61568 191 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 ACSM3Q53FZ2 586 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 LINC01356Q8N9X3 169 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 C19orf18Q8NEA5 215 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 OR51A2Q8NGJ7 313 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 MSI2Q96DH6 328 aaKnown RBP16.5■□□□□ 0.23
LIME1-205ENST00000480139 SMR3AQ99954 134 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 DNTTIP1Q9H147 329 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 ZNF696Q9H7X3 374 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 HES4Q9HCC6 221 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 TMEM138Q9NPI0 162 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 FOXJ3Q9UPW0 622 aa16.5■□□□□ 0.23
LIME1-205ENST00000480139 SF3B6Q9Y3B4 125 aaKnown RBP16.5■□□□□ 0.23
LIME1-205ENST00000480139 FAM157AC9JC47 383 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 MAGEB3O15480 346 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 LY6G6DO95868 133 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 WNT2P09544 360 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 RPS2P15880 293 aaKnown RBP16.49■□□□□ 0.23
LIME1-205ENST00000480139 TGFBR2P37173 567 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 PDZK1IP1Q13113 114 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 KISS1Q15726 138 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 SMIM21Q3B7S5 101 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 ARMCX4Q5H9R4 360 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 STUMQ69YW2 141 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 CRIP3Q6Q6R5 217 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 CLEC9AQ6UXN8 241 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 SLC25A26Q70HW3 274 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 MKXQ8IYA7 352 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 DEFB108BQ8NET1 73 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 TMIGD2Q96BF3 282 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 NEIL1Q96FI4 390 aaPredicted RBP16.49■□□□□ 0.23
LIME1-205ENST00000480139 WDR13Q9H1Z4 485 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 NDUFB11Q9NX14 153 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 KAAG1Q9UBP8 84 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 ABCA1O95477 2261 aa16.49■□□□□ 0.23
LIME1-205ENST00000480139 A8MXK9 166 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 PIN1P1O15428 100 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 CYB5AP00167 134 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 BDKRB2P30411 391 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 ATPAF1Q5TC12 328 aaPredicted RBP16.48■□□□□ 0.23
LIME1-205ENST00000480139 ACP7Q6ZNF0 438 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 NLRC3Q7RTR2 1065 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 Q8IYB0 196 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 SAXO1Q8IYX7 474 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 ZSCAN4Q8NAM6 433 aaPredicted RBP16.48■□□□□ 0.23
LIME1-205ENST00000480139 OR8B3Q8NGG8 313 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 PHYHIPQ92561 330 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 CEP19Q96LK0 163 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 OR8B2Q96RD0 313 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 RHOFQ9HBH0 211 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 NOX4Q9NPH5 578 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 MTCH1Q9NZJ7 389 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 NLKQ9UBE8 527 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 DNAJB11Q9UBS4 358 aa16.48■□□□□ 0.23
LIME1-205ENST00000480139 TRAV8-7A0A075B6U6 113 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 IGHV3OR15-7A0A075B7D8 119 aa16.47■□□□□ 0.23
LIME1-205ENST00000480139 MSMBP08118 114 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms