RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 RTL8AQ9BWD3 113 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 SIRPDQ9H106 197 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 PPP1R3EQ9H7J1 279 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 NOX4Q9NPH5 578 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 TNFRSF19Q9NS68 423 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 HAO2Q9NYQ3 351 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 CLEC2DQ9UHP7 191 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 ENPP5Q9UJA9 477 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 LSM2Q9Y333 95 aaKnown RBP11.86□□□□□ -0.51
ATG4B-218ENST00000479554 MPC1Q9Y5U8 109 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
ATG4B-218ENST00000479554 MGAM2Q2M2H8 2515 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 CENPVL3A0A0U1RRI6 287 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 POM121CA8CG34 1229 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 H3BMQ9 156 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 CDIPTO14735 213 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 FCN3O75636 299 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 CD36P16671 472 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 ETV1P50549 477 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 ARF6P62330 175 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 PRDX4Q13162 271 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 SPHARQ15513 63 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 PRR31Q5SQ13 230 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 Q6YL49 198 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 SLC36A1Q7Z2H8 476 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
ATG4B-218ENST00000479554 LHX4Q969G2 390 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 ITPKCQ96DU7 683 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 FAM71F1Q96KD3 344 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-218ENST00000479554 OR5M11Q96RB7 305 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 CCL13Q99616 98 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 MGLLQ99685 303 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 NAA50Q9GZZ1 169 aaKnown RBP11.85□□□□□ -0.51
ATG4B-218ENST00000479554 TLNRD1Q9H1K6 362 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 NIPAL2Q9H841 368 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 INPP5EQ9NRR6 644 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 RPUSD1Q9UJJ7 312 aaKnown RBP11.85□□□□□ -0.51
ATG4B-218ENST00000479554 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 LAMP5Q9UJQ1 280 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
ATG4B-218ENST00000479554 IGHV1-69DA0A0B4J2H0 117 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 A0A1B0GW55 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 TMEM210A6NLX4 147 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ZNF850A8MQ14 1090 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-218ENST00000479554 J3QRE1 110 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 GABARAPO95166 117 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 APOL3O95236 402 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 IGHV1-69P01742 117 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ACKR3P25106 362 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 TGFBR2P37173 567 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-218ENST00000479554 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 KRT77Q7Z794 578 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 FGFRL1Q8N441 504 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 OR8B12Q8NGG6 310 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 OR51G2Q8NGK0 314 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 LYZL4Q96KX0 146 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ISYNA1Q9NPH2 558 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DNAJB11Q9UBS4 358 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 LRP12Q9Y561 859 aa11.84□□□□□ -0.51
ATG4B-218ENST00000479554 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 NKX6-3A6NJ46 265 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 NDUFB3O43676 98 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 CST4P01036 141 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 CRYBA1P05813 215 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 MELTFP08582 738 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 LIMS3P0CW19 117 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 LIMS4P0CW20 117 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 HSMCR30P0CW71 290 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 OMGP23515 440 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 WNT4P56705 351 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 GMFBP60983 142 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 ACTC1P68032 377 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 ACTA1P68133 377 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 MLLT11Q13015 90 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-218ENST00000479554 IKZF1Q13422 519 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 CDONQ4KMG0 1287 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 STUMQ69YW2 141 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 FIP1L1Q6UN15 594 aaKnown RBP11.83□□□□□ -0.52
ATG4B-218ENST00000479554 ZDHHC23Q8IYP9 409 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 SCCPDHQ8NBX0 429 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 OR10Z1Q8NGY1 313 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 OR52N1Q8NH53 320 aa11.83□□□□□ -0.52
ATG4B-218ENST00000479554 OR5P3Q8WZ94 311 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms