RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 OR51D1Q8NGF3 324 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 OR10K1Q8NGX5 313 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 LGALS14Q8TCE9 139 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 SLAMF9Q96A28 289 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 SLC25A38Q96DW6 304 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 HIST1H2AAQ96QV6 131 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 PKIBQ9C010 78 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 MIXL1Q9H2W2 232 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 UFSP2Q9NUQ7 469 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 STEAP1Q9UHE8 339 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 LRBAP50851 2863 aa11.06□□□□□ -0.64
CHD3-210ENST00000479080 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.05□□□□□ -0.64
CHD3-210ENST00000479080 TMEM272A0A1B0GTI8 110 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 TMEM14DPA8MWL7 114 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 H7C417 338 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 ERVK11-1P61568 191 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 IL24Q13007 206 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 RIN1Q13671 783 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 RAB11BQ15907 218 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 FAM209AQ5JX71 171 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 IDNKQ5T6J7 187 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 METAP1DQ6UB28 335 aaPredicted RBP11.05□□□□□ -0.64
CHD3-210ENST00000479080 GLIPR1L1Q6UWM5 242 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 C20orf204Q6ZNR8 217 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 SLC25A26Q70HW3 274 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 TMEM104Q8NE00 496 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 YIPF5Q969M3 257 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 FOXRED1Q96CU9 486 aaPredicted RBP11.05□□□□□ -0.64
CHD3-210ENST00000479080 SEH1LQ96EE3 360 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 DIRC2Q96SL1 478 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 LIN7BQ9HAP6 207 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 GCM1Q9NP62 436 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 C14orf119Q9NWQ9 140 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 C1orf123Q9NWV4 160 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 TREM2Q9NZC2 230 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 ZNF581Q9P0T4 197 aa11.05□□□□□ -0.64
CHD3-210ENST00000479080 NOP16Q9Y3C1 178 aaKnown RBP11.05□□□□□ -0.64
CHD3-210ENST00000479080 PTPN13Q12923 2485 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 LYNX1G3V0Z9 82 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 WNT9BO14905 357 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 MAGEB3O15480 346 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 RP2O75695 350 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 KDM4BO94953 1096 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 PGA5P0DJD9 388 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 LYNX1P0DP58 116 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 CALCBP10092 127 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 BCL3P20749 454 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 RORCP51449 518 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 TESK1Q15569 626 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 FAM201AQ5SY85 155 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 CRYBG3Q68DQ2 2970 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 AWAT2Q6E213 333 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 ZNF573Q86YE8 665 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 GCSAMQ8N6F7 178 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 Q8NFD4 153 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 PXT1Q8NFP0 134 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 Q8TCH9 128 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 FAM3DQ96BQ1 224 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 GPER1Q99527 375 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 NRIP2Q9BQI9 281 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 MS4A5Q9H3V2 200 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 PLGRKTQ9HBL7 147 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 HES4Q9HCC6 221 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 SMURF1Q9HCE7 757 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 FAIMQ9NVQ4 179 aa11.04□□□□□ -0.64
CHD3-210ENST00000479080 RBFOX1Q9NWB1 397 aaKnown RBP11.04□□□□□ -0.64
CHD3-210ENST00000479080 CACNA1DQ01668 2161 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 HECTD1Q9ULT8 2610 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 A0A075B6Q4 140 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 CTDSP2O14595 271 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 AKR7A2O43488 359 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 NOS1APO75052 506 aaPredicted RBP11.03□□□□□ -0.64
CHD3-210ENST00000479080 TFF1P04155 84 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 OCMP0CE72 109 aaPredicted RBP11.03□□□□□ -0.64
CHD3-210ENST00000479080 TMEM225BP0DP42 221 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 COL8A2P25067 703 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 SSTR2P30874 369 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
CHD3-210ENST00000479080 PSMD7P51665 324 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 DGUOKQ16854 277 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 PCGF3Q3KNV8 242 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 C2orf76Q3KRA6 126 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 SAXO1Q8IYX7 474 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 ZSCAN4Q8NAM6 433 aaPredicted RBP11.03□□□□□ -0.64
CHD3-210ENST00000479080 POC1AQ8NBT0 407 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 OR51F2Q8NH61 342 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
CHD3-210ENST00000479080 WDR13Q9H1Z4 485 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 SAP30LQ9HAJ7 183 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 PTTG2Q9NZH5 202 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 IL36GQ9NZH8 169 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 FBLN5Q9UBX5 448 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms