RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 CDC6Q99741 560 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 PIGMQ9H3S5 423 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 PCDHB16Q9NRJ7 776 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 PCDHGA1Q9Y5H4 931 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 A0A1B0GW55 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 MED19A0JLT2 244 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 SCGNO76038 276 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 LCATP04180 440 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L2P0CJ85 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L3P0CJ86 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L4P0CJ87 422 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L5P0CJ88 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L6P0CJ89 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4L7P0CJ90 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 ZNF32P17041 273 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 OTX1P32242 354 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 PTGER4P35408 488 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 FOLR3P41439 243 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 NPBWR1P48145 328 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 RGS19P49795 217 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 RAC1P63000 192 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 HIST1H3AP68431 136 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 EXT1Q16394 746 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 HIST2H3PS2Q5TEC6 136 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 TSPO2Q5TGU0 170 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 FAHD2BQ6P2I3 314 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 HIST2H3AQ71DI3 136 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 TIPARPQ7Z3E1 657 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 GGNQ86UU5 652 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 PHYHIPLQ96FC7 376 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 FAHD2AQ96GK7 314 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 AIFM2Q9BRQ8 373 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 NMES1Q9C002 83 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DNTTIP1Q9H147 329 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 PLEKHJ1Q9NW61 149 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 DUX4Q9UBX2 424 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 A0A087WZY1 265 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 A0A0U1RQV5 110 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 C3orf80F5H4A9 247 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 SGCEO43556 437 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 LRP3O75074 770 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 CBR3O75828 277 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 TBPP20226 339 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 THBS4P35443 961 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 NOVA1P51513 510 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 CARD18P57730 90 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 RIPPLY1Q0D2K3 151 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 PIGYQ3MUY2 71 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 SPINK14Q6IE38 97 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 H3F3CQ6NXT2 135 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 PEG10Q86TG7 708 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 M1APQ8TC57 530 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 ABHD3Q8WU67 409 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 TOMM40LQ969M1 308 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 REEP6Q96HR9 211 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 NUDT16L1Q9BRJ7 211 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 ZNF2Q9BSG1 426 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 NAA11Q9BSU3 229 aaPredicted RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 NXT1Q9UKK6 140 aaKnown RBP9.41□□□□□ -0.9
VPS52-217ENST00000478934 ZNF407Q9C0G0 2248 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 CFAP47Q6ZTR5 3102 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 KIAA1549Q9HCM3 1950 aa9.41□□□□□ -0.9
VPS52-217ENST00000478934 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FIGNL2A6NMB9 653 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FAM157CP0CG43 387 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 TDGF1P13385 188 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FPR2P25090 351 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 AKR1C3P42330 323 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 TAS2R31P59538 309 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 PNLIPRP3Q17RR3 467 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 MST1LQ2TV78 715 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FAM27BQ5VT28 67 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 ETV3LQ6ZN32 361 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 SEMA6DQ8NFY4 1073 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 PCSK5Q92824 1860 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 LRRC3CA6NJW4 275 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 ZNF716A6NP11 495 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 ZNF587BE7ETH6 402 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 F8VVB4 439 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 F8VWA3 439 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FGF16O43320 207 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 SYNGR3O43761 229 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 CCL2P13500 99 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 TCN2P20062 427 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 CRYGSP22914 178 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 ZNF84P51523 738 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 FXYD4P59646 89 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 PSG4Q00888 419 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 SRYQ05066 204 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 SPEM2Q0P670 501 aa9.4□□□□□ -0.9
VPS52-217ENST00000478934 RPUSD3Q6P087 351 aaKnown RBP9.4□□□□□ -0.9
VPS52-217ENST00000478934 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
VPS52-217ENST00000478934 FOXL2NBQ6ZUU3 175 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms