RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 OR13C9Q8NGT0 318 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 NPRL2Q8WTW4 380 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 MSI2Q96DH6 328 aaKnown RBP22.41■■□□□ 1.18
CCM2-211ENST00000478582 NEK6Q9HC98 313 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 ACOT13Q9NPJ3 140 aa22.41■■□□□ 1.18
CCM2-211ENST00000478582 F5H0A9 414 aaPredicted RBP22.4■■□□□ 1.18
CCM2-211ENST00000478582 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.4■■□□□ 1.18
CCM2-211ENST00000478582 TNFRSF13BO14836 293 aaPredicted RBP22.4■■□□□ 1.18
CCM2-211ENST00000478582 SULT1B1O43704 296 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 NOS1APO75052 506 aaPredicted RBP22.4■■□□□ 1.18
CCM2-211ENST00000478582 MUC1P15941 1255 aaPredicted RBP22.4■■□□□ 1.18
CCM2-211ENST00000478582 CD80P33681 288 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 ATP1B3P54709 279 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 ASPHD2Q6ICH7 369 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 LHFPL2Q6ZUX7 228 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 CALHM1Q8IU99 346 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 SVOPQ8N4V2 548 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 OPALINQ96PE5 141 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 MGLLQ99685 303 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 MIOXQ9UGB7 285 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 PCDHB10Q9UN67 800 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 POLDIP2Q9Y2S7 368 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 MALRD1Q5VYJ5 2156 aa22.4■■□□□ 1.18
CCM2-211ENST00000478582 CEACAM18A8MTB9 384 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 NDUFA2O43678 99 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 GPX5O75715 221 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 IL24Q13007 206 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 CHRFAM7AQ494W8 412 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 KCTD21Q4G0X4 260 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 SFRP4Q6FHJ7 346 aaPredicted RBP22.39■■□□□ 1.17
CCM2-211ENST00000478582 DCDC5Q6ZRR9 648 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 ZNF367Q7RTV3 350 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 ANGPTL5Q86XS5 388 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 SPARTQ8N0X7 666 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 C19orf18Q8NEA5 215 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 DEFB108BQ8NET1 73 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 THRSPQ92748 146 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 UFD1Q92890 307 aa22.39■■□□□ 1.17
CCM2-211ENST00000478582 C12orf43Q96C57 262 aaKnown RBP22.39■■□□□ 1.17
CCM2-211ENST00000478582 TRBV5-7A0A0A0MS05 114 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 FAM157AC9JC47 383 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 C3orf80F5H4A9 247 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 AKR7A2O43488 359 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 SYNGR1O43759 233 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 WNT2P09544 360 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 RAB3AP20336 220 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 MTCP1P56278 107 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 FAM166AQ6J272 317 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 LINC01356Q8N9X3 169 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 POC1AQ8NBT0 407 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 RASL12Q9NYN1 266 aa22.38■■□□□ 1.17
CCM2-211ENST00000478582 KIAA1324LA8MWY0 1029 aaPredicted RBP22.37■■□□□ 1.17
CCM2-211ENST00000478582 B4DSR2 109 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 ZNF879B4DU55 563 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 OCMP0CE72 109 aaPredicted RBP22.37■■□□□ 1.17
CCM2-211ENST00000478582 HSMCR30P0CW71 290 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 PGA5P0DJD9 388 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 CPEP16870 476 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 PCMT1P22061 227 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 MICBQ29980 383 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 LIPKQ5VXJ0 399 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 ZNF773Q6PK81 442 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 UNQ9370/PRO34162Q6UXP9 181 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 FAM90A1Q86YD7 464 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 OR14A2Q96R54 314 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 WDR13Q9H1Z4 485 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 TAS2R4Q9NYW5 299 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 CDC42EP3Q9UKI2 254 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 KCNS2Q9ULS6 477 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 LRCH1Q9Y2L9 728 aa22.37■■□□□ 1.17
CCM2-211ENST00000478582 IGFBP3P17936 291 aaPredicted RBP22.36■■□□□ 1.17
CCM2-211ENST00000478582 GLRA1P23415 457 aa22.36■■□□□ 1.17
CCM2-211ENST00000478582 DERL3Q96Q80 235 aa22.36■■□□□ 1.17
CCM2-211ENST00000478582 NRIP2Q9BQI9 281 aa22.36■■□□□ 1.17
CCM2-211ENST00000478582 TGFAP01135 160 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 ALDOBP05062 364 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 FSTP19883 344 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 MAPK3P27361 379 aaPredicted RBP22.35■■□□□ 1.17
CCM2-211ENST00000478582 ERVK11-1P61568 191 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 UBE2UQ5VVX9 321 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 CRIP3Q6Q6R5 217 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 NEIL1Q96FI4 390 aaPredicted RBP22.35■■□□□ 1.17
CCM2-211ENST00000478582 KAAG1Q9UBP8 84 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 LPAR3Q9UBY5 353 aa22.35■■□□□ 1.17
CCM2-211ENST00000478582 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.35■■□□□ 1.172e-7■■■□□ 15.8
CCM2-211ENST00000478582 IGHV3OR15-7A0A075B7D8 119 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 SC5DO75845 299 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 RPS2P15880 293 aaKnown RBP22.34■■□□□ 1.17
CCM2-211ENST00000478582 TRAM1Q15629 374 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 ATPAF1Q5TC12 328 aaPredicted RBP22.34■■□□□ 1.17
CCM2-211ENST00000478582 LYPD2Q6UXB3 125 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 PHC2Q8IXK0 858 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 OR51A2Q8NGJ7 313 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 FCGR1BQ92637 280 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 TMIGD2Q96BF3 282 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 SEH1LQ96EE3 360 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 TMED9Q9BVK6 235 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 BEX2Q9BXY8 128 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 HES4Q9HCC6 221 aa22.34■■□□□ 1.17
CCM2-211ENST00000478582 TMEM138Q9NPI0 162 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms