RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PIGLQ9Y2B2 252 aa13.55□□□□□ -0.24
TRIM13-208ENST00000478111 NOS1APO75052 506 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 SRSF10O75494 262 aaKnown RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 TTRP02766 147 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 MRPL3P09001 348 aaKnown RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 PGA5P0DJD9 388 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 CCL3L1P16619 93 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 CALB2P22676 271 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 PRDX2P32119 198 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 CEBPDP49716 269 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 CAPZA1P52907 286 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 RPL31P62899 125 aaKnown RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 MFGE8Q08431 387 aaPredicted RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 PLCXD3Q63HM9 321 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 ZNF679Q8IYX0 411 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 OR4C13Q8NGP0 309 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 MROQ9BYG7 248 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 HEXA-AS1Q9H8Q6 139 aa13.54□□□□□ -0.24
TRIM13-208ENST00000478111 NUFIP1Q9UHK0 495 aaKnown RBP13.54□□□□□ -0.24
TRIM13-208ENST00000478111 FAM90A8PA6NJQ4 464 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 AQP12BA6NM10 295 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 GNGT2O14610 69 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 GSC2O15499 205 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 ZNF254O75437 659 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 BMXP51813 675 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 DLX6P56179 175 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 ZNF273Q14593 569 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 SMIM21Q3B7S5 101 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 TMEM42Q69YG0 159 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 LHFPL4Q7Z7J7 247 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 AQP12AQ8IXF9 295 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 ZNF561Q8N587 486 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 OR4M1Q8NGD0 313 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 OR2T6Q8NHC8 308 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 NRIP2Q9BQI9 281 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 TTTY10Q9BZA0 68 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 C1orf21Q9H246 121 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 HES4Q9HCC6 221 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 TVP23BQ9NYZ1 205 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 ENPP5Q9UJA9 477 aa13.53□□□□□ -0.24
TRIM13-208ENST00000478111 A0A1B0GTI1 187 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 VGLL3A8MV65 326 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 J3QT63 122 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 DHRS3O75911 302 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 NRASP01111 189 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 ANXA8P13928 327 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 HAAOP46952 286 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 SNAPC1Q16533 368 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 FBLN7Q53RD9 439 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF684Q5T5D7 378 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 COMMD2Q86X83 199 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF556Q9HAH1 456 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 RAB18Q9NP72 206 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 SERTAD4Q9NUC0 356 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 USE1Q9NZ43 259 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 V9GYS6 101 aa13.52□□□□□ -0.25
TRIM13-208ENST00000478111 COL7A1Q02388 2944 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 PQLC2LA1A4F0 135 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 C17orf98A8MV24 154 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 SLC1A7O00341 560 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 MAGEB4O15481 346 aaPredicted RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 E2F6O75461 281 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 PRB2P02812 416 aaPredicted RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 TK1P04183 234 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 COX7A1P24310 79 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 RIDAP52758 137 aaKnown RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 CRISP1P54107 249 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 ERVK11-1P61568 191 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF829Q3KNS6 432 aaPredicted RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 LDLRAD2Q5SZI1 272 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 LIAT1Q6ZQX7 453 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 Q6ZSR3 168 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF573Q86YE8 665 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 BATF2Q8N1L9 274 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 OR14K1Q8NGZ2 314 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 WIPF2Q8TF74 440 aaPredicted RBP13.51□□□□□ -0.25
TRIM13-208ENST00000478111 ASB17Q8WXJ9 295 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 NPFFR1Q9GZQ6 430 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 GPR173Q9NS66 373 aa13.51□□□□□ -0.25
TRIM13-208ENST00000478111 A0A1W2PPH5 198 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 DLGAP1O14490 977 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 VSIG10L2P0DP72 767 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 MPZP25189 248 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 RAB13P51153 203 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 HABP2Q14520 560 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-208ENST00000478111 CLVS2Q5SYC1 327 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-208ENST00000478111 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
TRIM13-208ENST00000478111 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 ELMOD2Q8IZ81 293 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 LYG1Q8N1E2 194 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 Q8N2B8 174 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 DNAJB9Q9UBS3 223 aa13.5□□□□□ -0.25
TRIM13-208ENST00000478111 IKZF2Q9UKS7 526 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms