RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 THBS3P49746 956 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 CEACAM21Q3KPI0 293 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 LINC01590Q5TEZ4 76 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 HAGHLQ6PII5 290 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 OR8D4Q8NGM9 314 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 OR6N2Q8NGY6 317 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 HOPXQ9BPY8 73 aaPredicted RBP16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 ZNF649Q9BS31 505 aa16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 LSM4Q9Y4Z0 139 aaKnown RBP16.14■□□□□ 0.17
PDLIM1-202ENST00000477757 HUWE1Q7Z6Z7 4374 aaKnown RBP16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 SLC22A2O15244 555 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 TK1P04183 234 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 SEMG1P04279 462 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 LPLP06858 475 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 H2BFMP0C1H6 154 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 CEP78Q5JTW2 689 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 UNQ9370/PRO34162Q6UXP9 181 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 PIGWQ7Z7B1 504 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 ZNF488Q96MN9 340 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 OR8B4Q96RC9 309 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 INTS14Q96SY0 518 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 VIPAS39Q9H9C1 493 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 IL20Q9NYY1 176 aa16.13■□□□□ 0.17
PDLIM1-202ENST00000477757 NDUFAB1O14561 156 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 PGA5P0DJD9 388 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 DOC2BQ14184 412 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 ABCA11PQ4W5N1 156 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 ERI1Q8IV48 349 aaKnown RBP16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 OR8B12Q8NGG6 310 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 TFAP2CQ92754 450 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 TBC1D23Q9NUY8 699 aa16.12■□□□□ 0.17
PDLIM1-202ENST00000477757 RAMP3O60896 148 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 PSMA6P60900 246 aaKnown RBP16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 OSR2Q8N2R0 312 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 LINC00471Q8N535 108 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 OR5A2Q8NGI9 324 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 RP9Q8TA86 221 aaKnown RBP16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 NDNFQ8TB73 568 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 FAM81AQ8TBF8 368 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 CAPSLQ8WWF8 208 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 ABCD2Q9UBJ2 740 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 V9GYQ6 96 aa16.11■□□□□ 0.17
PDLIM1-202ENST00000477757 LCE6AA0A183 80 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 RRM2P31350 389 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 NUDT2P50583 147 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 ACTA2P62736 377 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 ACTG2P63267 376 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 ACTC1P68032 377 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 ACTA1P68133 377 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 IL18R1Q13478 541 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 GLYATQ6IB77 296 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 TCF23Q7RTU1 214 aa16.1■□□□□ 0.17
PDLIM1-202ENST00000477757 IGHV2-26A0A0B4J1V2 119 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 MEX3AA1L020 520 aaKnown RBP16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 J3QT63 122 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 K7N7A8 449 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 NOS1APO75052 506 aaPredicted RBP16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 NXPH2O95156 264 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 AMY1AP04745 511 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 AMY2AP04746 511 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 SLC6A1P30531 599 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 GSTT1P30711 240 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 MAP2K3P46734 347 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 RPL23AP62750 156 aaKnown RBP16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 DMRTC1Q5HYR2 192 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 SHFQ7M4L6 423 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 OR4Q3Q8NH05 313 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 ZNF714Q96N38 554 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 NRIP2Q9BQI9 281 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 BTBD10Q9BSF8 475 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 SLC25A33Q9BSK2 321 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 HES4Q9HCC6 221 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 BAIAP2Q9UQB8 552 aa16.09■□□□□ 0.17
PDLIM1-202ENST00000477757 DSCAML1Q8TD84 2053 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 DNAJC8O75937 253 aaPredicted RBP16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 OR2F2O95006 317 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 MYCNOSP40205 109 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 PLCXD3Q63HM9 321 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 HACD2Q6Y1H2 254 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 RASSF6Q6ZTQ3 369 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 OR2W3Q7Z3T1 314 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 Q8NFD4 153 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 OR9Q2Q8NGE9 314 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 ITFG2Q969R8 447 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 PYURFQ96I23 114 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 P2RX4Q99571 388 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 ASCL2Q99929 193 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 TSSK6Q9BXA6 273 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 VNN3Q9NY84 501 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 OR14J1Q9UGF5 321 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 SESN1Q9Y6P5 492 aa16.08■□□□□ 0.16
PDLIM1-202ENST00000477757 STARD9Q9P2P6 4700 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 PSMB11A5LHX3 300 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 SH2D7A6NKC9 451 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 HMGB1P1B2RPK0 211 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 LYNP07948 512 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 COX4I1P13073 169 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 CD24P25063 80 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 EDDM3BP56851 147 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms