RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TSC22D3Q99576 134 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 DCUN1D5Q9BTE7 237 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 CENPOQ9BU64 300 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 TMED9Q9BVK6 235 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 PAPOLGQ9BWT3 736 aaKnown RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 COMMD4Q9H0A8 199 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 DCSTAMPQ9H295 470 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 MOB1AQ9H8S9 216 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 OPN4Q9UHM6 478 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 NOP16Q9Y3C1 178 aaKnown RBP6.92□□□□□ -1.3
HDAC6-221ENST00000477561 R4GMQ9 66 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 ARHGAP32A7KAX9 2087 aa6.92□□□□□ -1.3
HDAC6-221ENST00000477561 IGHV3OR15-7A0A075B7D8 119 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM269A0A1B0GVZ9 245 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 TMEM212A6NML5 194 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF850A8MQ14 1090 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 LOC110117498-PIK3R3F6TDL0 507 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 J3QLI3 93 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GABRPO00591 440 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 TCF21O43680 179 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GATBO75879 557 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 ARL6IP5O75915 188 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 PTBP3O95758 552 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF182P17025 639 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 EGR1P18146 543 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 CFL1P23528 166 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 ACKR3P25106 362 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 MAPK3P27361 379 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 THBS2P35442 1172 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 SOX6P35712 828 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GNALP38405 381 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 PSMA6P60900 246 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GMFBP60983 142 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GNB2P62879 340 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 FABP5Q01469 135 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF154Q13106 437 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 DMRTC1Q5HYR2 192 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 C1QL2Q7Z5L3 287 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 WDR86Q86TI4 376 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 C11orf53Q8IXP5 236 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 SPERTQ8NA61 448 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 OR8B3Q8NGG8 313 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 OR5AK2Q8NH90 309 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 RPS4Y2Q8TD47 263 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 PIGCQ92535 297 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 NEIL1Q96FI4 390 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 PGLYRP3Q96LB9 341 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 OR8B2Q96RD0 313 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 SSBP3Q9BWW4 388 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 C14orf119Q9NWQ9 140 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 TXNL4BQ9NX01 149 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 CCDC59Q9P031 241 aaKnown RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 MIOXQ9UGB7 285 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 OR5V1Q9UGF6 321 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 GTF2A1LQ9UNN4 478 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 INSIG2Q9Y5U4 225 aa6.91□□□□□ -1.3
HDAC6-221ENST00000477561 SIRT4Q9Y6E7 314 aaPredicted RBP6.91□□□□□ -1.3
HDAC6-221ENST00000477561 IGHV3OR16-10A0A075B7F0 116 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 ACOD1A6NK06 481 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 A8MXK9 166 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 LGALS8O00214 317 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 CDIPTO14735 213 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 VENTXO95231 258 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 IL1AP01583 271 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 GYPAP02724 150 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF12P17014 697 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 EPHA1P21709 976 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 GATA3P23771 443 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 MYL9P24844 172 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 PITPNBP48739 271 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 MFGE8Q08431 387 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-221ENST00000477561 MZT1Q08AG7 82 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 PRDX4Q13162 271 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 ACSM3Q53FZ2 586 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 BCL2L15Q5TBC7 163 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 C22orf42Q6IC83 251 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 DCDC5Q6ZRR9 648 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 NLRC3Q7RTR2 1065 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 CEACAM19Q7Z692 300 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 COMMD2Q86X83 199 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 CATSPERDQ86XM0 798 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 GCSAMQ8N6F7 178 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 ZNF676Q8N7Q3 588 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 CSNK2A3Q8NEV1 391 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 OR1M1Q8NGA1 313 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 OR2G2Q8NGZ5 317 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 SPATA3Q8NHX4 192 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 NANPQ8TBE9 248 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 OR51E1Q8TCB6 317 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 DYNC2LI1Q8TCX1 351 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 LRRC29Q8WV35 223 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 ITPKCQ96DU7 683 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 SEH1LQ96EE3 360 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 FAM71F1Q96KD3 344 aaPredicted RBP6.9□□□□□ -1.3
HDAC6-221ENST00000477561 MICU1Q9BPX6 476 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 C19orf24Q9BVV8 132 aa6.9□□□□□ -1.3
HDAC6-221ENST00000477561 FGF23Q9GZV9 251 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms